Mercurial > repos > cstrittmatter > skesa

changeset 12:1946411b25bc draft

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Uploaded
author estrain
date Thu, 16 Aug 2018 14:05:56 -0400
parents 1b69d1441486
children a28a41742990
files skesa.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/skesa.xml	Thu Aug 16 14:04:46 2018 -0400
+++ b/skesa.xml	Thu Aug 16 14:05:56 2018 -0400
@@ -14,7 +14,7 @@
       #else if $jobtype.select == "pe"
 	--fastq $fastq1,$fastq2 --use_paired_ends
       #else if $jobtype.select == "rp"
-	--fastq $pairedf['forward'],$pairedf['reverse'] --use_paired_ends
+	--fastq $pairedf.forward,$pairedf.reverse --use_paired_ends
       #end if
       #if $cores != 0
       --cores $cores