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comparison data/amrfinder/AMR_DNA-Campylobacter @ 3:0cbed1c0a762 draft default tip

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planemo upload commit 15239f1674081ab51ab8dd75a9a40cf1bfaa93e8
author cstrittmatter
date Tue, 28 Jan 2020 10:42:31 -0500
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2:6837f733b4aa 3:0cbed1c0a762
1 >NC_022347.1@23S_ribosomal_RNA:1040292-1037381
2 aaaaaaggtaagctactaagagcgaatggtggatgccttgactggtaaaggcgatgaaggacgtactagactgcgataag
3 ctacggggagctgtcaagaagctttgatccgtagatttccgaatggggcaacccaatgtatagagatatacattacctat
4 ataggagcgaacgaggggaattgaaacatcttagtaccctcaggaaaagaaatcaatagagattgcgtcagtagcggcga
5 gcgaaagcgcaagagggcaaacccagtgcttgcactgggggttgtaggactgcaatgtgcaagaggtaagtttagcagaa
6 cattctggaaagtatagccatagagggtgatagtcccgtatgcgaaaaacaaaccttagctagcagtatcctgagtaggg
7 cgggacacgagaaatcctgtctgaagctgggtcgaccacgatccaaccctaaatactaataccagatcgatagtgcacaa
8 gtaccgtgagggaaaggtgaaaagaactgaggtgatcagagtgaaatagaacctgaaaccatttgcttacaatcattcag
9 agccctatgtagcaatacagggtgatggactgccttttgcataatgagcctgcgagttgtggtgtctggcaaggttaagc
10 aaacgcgaagccgtagcgaaagcgagtctgaatagggcgcttagtcagatgctgcagacccgaaacgaagtgatctatcc
11 atgagcaagttgaagctagtgtaagaactagtggaggactgaacccataggcgttgaaaagccccgggatgacttgtgga
12 taggggtgaaaggccaatcaaacttcgtgatagctggttctctccgaaatatatttaggtatagcgttgtgtcgtaatat
13 aagggggtagagcactgaatgggctagggcatacaccaatgtaccaaaccctatcaaactccgaataccttatatgtaat
14 cacagcagtcaggcggcgagtgataaaatccgtcgtcaagagggaaacaacccagactaccagctaaggtccctaaatct
15 tacttaagtggaaaacgatgtgaagttacttaaacaaccaggaggttggcttagaagcagccatcctttaaagaaagcgt
16 aatagctcactggtctagtgattttgcgcggaaaatataacggggctaaagtaagtaccgaagctgtagacttgcgcaca
17 acttagattatttaagtttagaatatgagaaactaagttatatgtttagttatatttttactgatttttatagagtaaag
18 atagaaataaaacttagtaaaatcagtaaaaatattcttagactaaagttaagtagtttaagttgtgtgcaagtggtagg
19 agagcgttctatttgcgtcgaaggtataccggtaaggagtgctggagcgaatagaagtgagcatgcaggcatgagtagcg
20 ataattaatgtgagaatcattaacgccgtaaacccaaggtttcctacgcgatgctcgtcatcgtagggttagtcgggtcc
21 taagtcgagtccgaaaggggtagacgatggcaaattggttaatattccaataccaacattagtgtgcgatggaaggacgc
22 ttagggctaagggggctagcggatggaagtgctagtctaaggtcgtaggaggttatacaggcaaatccgtataacaatac
23 tccgagaactgaaaggctttttgaagtcttcggatggatagaagaacccctgatgccgtcgagccaagaaaagtttctaa
24 gtttagctaatgttgcccgtaccgtaaaccgacacaggtgggtgggatgagtattctaaggcgcgtggaagaactctctt
25 taaggaactctgcaaaatagcaccgtatcttcggtataaggtgtggttcgcttcgtattaggatttactccgaaagcgaa
26 gaaacttacaacaaagagtccctcccgactgtttaccaaaaacacagcactctgctaactcgtaagaggatgtatagggt
27 gtgacgcctgcccggtgctcgaaggttaattgatggggttagcattagcgaagctcttgatcgaagcccgagtaaacggc
28 ggccgtaactataacggtcctaaggtagcgaaattccttgtcggttaaataccgacctgcatgaatggcgtaacgagatg
29 ggagctgtctcaaagagggatccagtgaaattgtagtggaggtgaaaattcctcctacccgcggcaagacggaaagaccc
30 cgtggacctttactacagcttgacactgctatttggataagaatgtgcaggataggtgggaggctttgagtatatgacgc
31 cagttgtatatgagccattgttgagataccactctttcttatttgggtagctaaccagcttgagttatcctcaagtggga
32 caatgtctggtgggtagtttgactggggcggtcgcctcccaaataataacggaggcttacaaaggttggctcagaacggt
33 tggaaatcgttcgtagagtataaaggtataagccagcttaactgcaagacatacaagtcaagcagagacgaaagtcggtc
34 ttagtgatccggtggttctgcgtggaagggccatcgctcaaaggataaaaggtaccccggggataacaggctgatctccc
35 ccaagagctcacatcgacggggaggtttggcacctcgatgtcggctcatcgcatcctggggctggagcaggtcccaaggg
36 tatggctgttcgccatttaaagcggtacgcgagctgggttcagaacgtcgtgagacagttcggtccctatctgccgtggg
37 cgtaagaagattgaagagatttgaccctagtacgagaggaccgggttgaacaaaccactggtgtagctgttgttctgcca
38 agagcatcgcagcgtagctaagtttggaaagg
39 >NC_002163.1@23S_ribosomal_RNA:396449-399360
40 agctactaagagcgaatggtggatgccttgactggtaaaggcgatgaaggacgtactagactgcgataagctacggggag
41 ctgtcaagaagctttgatccgtagatttccgaatggggcaacccaatgtatagagatatacattacctatataggagcga
42 acgaggggaattgaaacatcttagtaccctcaggaaaagaaatcaatagagattgcgtcagtagcggcgagcgaaagcgc
43 aagagggcaaacccagtgcttgcactgggggttgtaggactgcaatgtgcaagagctgagtttagcagaacattctggaa
44 agtatagccatagagggtgatagtcccgtatgcgaaaaacaaagcttagctagcagtatcctgagtagggcgggacacga
45 ggaatcctgtctgaatccgggtcgaccacgatccaaccctaaatactaataccagatcgatagtgcacaagtaccgtgag
46 ggaaaggtgaaaagaactgaggtgatcagagtgaaatagaacctgaaaccatttgcttacaatcattcagagcactatgt
47 agcaatacagtgtgatggactgccttttgcataatgagcctgcgagttgtggtgtctggcaaggttaagcaaacgcgaag
48 ccgtagcgaaagcgagtctgaatagggcgcttagtcagatgctgcagacccgaaacgaagtgatctatccatgagcaagt
49 tgaagctagtgtaagaactagtggaggactgaacccataggcgttgaaaagccccgggatgacttgtggataggggtgaa
50 aggccaatcaaacttcgtgatagctggttctctccgaaatatatttaggtatagcgttgtgtcgtaatataagggggtag
51 agcactgaatgggctagggcatacaccaatgtaccaaaccctatcaaactccgaataccttatatgtaatcacagcagtc
52 aggcggcgagtgataaaatccgtcgtcaagagggaaacaacccagactaccagctaaggtccctaaatcttacttaagtg
53 gaaaacgatgtgaagttacttaaacaaccaggaggttggcttagaagcagccatcctttaaagaaagcgtaatagctcac
54 tggtctagtgattttgcgcggaaaatataacggggctaaagtaagtaccgaagctgtagacttagtttactaagtggtag
55 gagagcgttctatttgcgtcgaaggtataccggtaaggagtgctggagcgaatagaagtgagcatgcaggcatgagtagc
56 gataattaatgtgagaatcattaacgccgtaaacccaaggtttcctacgcgatgctcgtcatcgtagggttagtcgggtc
57 ctaagtcgagtccgaaaggggtagacgatggcaaattggttaatattccaataccaacattagtgtgcgatggaaggacg
58 cttagggctaagggggctagcggatggaagtgctagtctaaggtcgtaggaggttatacaggcaaatccgtataacaata
59 ctccgagaactgaaaggctttttgaagtcttcggatggatagaagaacccctgatgccgtcgagccaagaaaagtttcta
60 agtttagctaatgttgcccgtaccgtaaaccgacacaggtgggtgggatgagtattctaaggcgcgtggaagaactctct
61 ttaaggaactctgcaaaatagcaccgtatcttcggtataaggtgtggttagctttgtattaggatttactctgaaagcaa
62 ggaaacttacaacaaagagtccctcccgactgtttaccaaaaacacagcactctgctaactcgtaagaggatgtataggg
63 tgtgacgcctgcccggtgctcgaaggttaattgatggggttagcattagcgaagctcttgatcgaagcccgagtaaacgg
64 cggccgtaactataacggtcctaaggtagcgaaattccttgtcggttaaataccgacctgcatgaatggcgtaacgagat
65 gggagctgtctcaaagagggatccagtgaaattgtagtggaggtgaaaattcctcctacccgcggcaagacggaaagacc
66 ccgtggacctttactacagcttgacactgctacttggataagaatgtgcaggataggtgggaggctttgagtatatgacg
67 ccagttgtatatgagccattgttgagataccactctttcttatttgggtagctaaccagcttgagttatcctcaagtggg
68 acaatgtctggtgggtagtttgactggggcggtcgcctcccaaataataacggaggcttacaaaggttggctcagaacgg
69 ttggaaatcgttcgtagagtataaaggtataagccagcttaactgcaagacatacaagtcaagcagagacgaaagtcggt
70 cttagtgatccggtggttctgtgtggaagggccatcgctcaaaggataaaaggtaccccggggataacaggctgatctcc
71 cccaagagctcacatcgacggggaggtttggcacctcgatgtcggctcatcgcatcctggggctggagcaggtcccaagg
72 gtatggctgttcgccatttaaagcggtacgcgagctgggttcagaacgtcgtgagacagttcggtccctatctgccgtgg
73 gcgtaagaagattgaagagatttgaccctagtacgagaggaccgggttgaacaaaccactggtgtagctgttgttctgcc
74 aagagcatcgcagcgtagctaagtttggaaaggataaacgctgaaagcatctaagcgtgaagccaactctaagatgaatc
75 ttctctaagctctctagaagactactagtttgataggctgggtgtgtaatggatgaaagtcctttagctgaccagtacta
76 atagagcgtttggcttatctttaataaagcat