Mercurial > repos > dannon > metaphlan
annotate metaphlan_to_phyloxml.xml @ 4:80b22b31633f
Updated for MetaPhlAn v1.7 and tool_dependencies added for auto install
author | Jim Johnson <jj@umn.edu> |
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date | Thu, 11 Oct 2012 12:01:20 -0500 |
parents | 016f6375aadc |
children | 73f082e9fa2d |
rev | line source |
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1
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Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
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1 <tool id="meta_to_phylo" name="MetaPhlAn to PhyloXML" version="1.0.0"> |
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Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
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2 <description>Converter</description> |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
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3 <command interpreter="python"> |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
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4 metaphlan_to_phyloxml.py $input $output |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
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5 </command> |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
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6 <inputs> |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
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7 <param name="input" type="data" format="tabular" label="Input MetaPhlAn File"/> |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
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8 </inputs> |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
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9 <outputs> |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
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10 <data format="xml" name="output" label="${tool.name} on ${on_string}" /> |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
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11 </outputs> |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
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12 <tests> |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
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13 </tests> |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
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14 <help> |
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Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
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15 MetaPhlAn to PhyloXML Converter |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
diff
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16 </help> |
016f6375aadc
Initial commit of metaphlan_to_phyloxml converter.
Dannon Baker <dannonbaker@me.com>
parents:
diff
changeset
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17 </tool> |