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comparison examples/Galaxy-Workflow-Figure(1).ga @ 9:f3462128e87c

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Minor alterations to the galaxy interface with some better examples and error messages added.
author davidmurphy
date Mon, 30 Jan 2012 08:17:57 -0500
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8:5149eb3a89c2 9:f3462128e87c
1 {
2 "a_galaxy_workflow": "true",
3 "annotation": "Generates part B",
4 "format-version": "0.1",
5 "name": "Figure",
6 "steps": {
7 "0": {
8 "annotation": "",
9 "id": 0,
10 "input_connections": {},
11 "inputs": [
12 {
13 "description": "",
14 "name": "Input Dataset"
15 }
16 ],
17 "name": "Input dataset",
18 "outputs": [],
19 "position": {
20 "left": 197,
21 "top": 384
22 },
23 "tool_errors": null,
24 "tool_id": null,
25 "tool_state": "{\"name\": \"Input Dataset\"}",
26 "tool_version": null,
27 "type": "data_input",
28 "user_outputs": []
29 },
30 "1": {
31 "annotation": "",
32 "id": 1,
33 "input_connections": {
34 "input": {
35 "id": 0,
36 "output_name": "output"
37 }
38 },
39 "inputs": [],
40 "name": "Codon Logo",
41 "outputs": [
42 {
43 "name": "output",
44 "type": "pdf"
45 }
46 ],
47 "position": {
48 "left": 580,
49 "top": 228
50 },
51 "post_job_actions": {},
52 "tool_errors": null,
53 "tool_id": "codonlogo",
54 "tool_state": "{\"outformat\": \"\\\"pdf\\\"\", \"frame\": \"\\\"0\\\"\", \"size\": \"\\\"large\\\"\", \"__page__\": 0, \"colours\": \"{\\\"colour\\\": \\\"no\\\", \\\"__current_case__\\\": 0}\", \"strict\": \"\\\"False\\\"\", \"logoname\": \"\\\"0 Frame\\\"\", \"ylabel\": \"\\\"\\\"\", \"input\": \"null\", \"stackheight\": \"\\\"100\\\"\", \"scalewidth\": \"\\\"True\\\"\", \"showyaxis\": \"\\\"True\\\"\", \"comp\": \"{\\\"mode\\\": \\\"equiprobable\\\", \\\"__current_case__\\\": 1}\", \"showxaxis\": \"\\\"True\\\"\", \"stackwidth\": \"\\\"40.0\\\"\", \"box\": \"\\\"False\\\"\", \"fineprint\": \"\\\"\\\"\", \"range\": \"{\\\"seqend\\\": \\\"16\\\", \\\"mode\\\": \\\"part\\\", \\\"__current_case__\\\": 1, \\\"seqstart\\\": \\\"6\\\"}\", \"xlabel\": \"\\\"\\\"\", \"errorbars\": \"\\\"True\\\"\", \"resolution\": \"\\\"96\\\"\", \"stacks\": \"\\\"20\\\"\"}",
55 "tool_version": "3",
56 "type": "tool",
57 "user_outputs": []
58 },
59 "2": {
60 "annotation": "",
61 "id": 2,
62 "input_connections": {
63 "input": {
64 "id": 0,
65 "output_name": "output"
66 }
67 },
68 "inputs": [],
69 "name": "Codon Logo",
70 "outputs": [
71 {
72 "name": "output",
73 "type": "pdf"
74 }
75 ],
76 "position": {
77 "left": 580,
78 "top": 360
79 },
80 "post_job_actions": {},
81 "tool_errors": null,
82 "tool_id": "codonlogo",
83 "tool_state": "{\"outformat\": \"\\\"pdf\\\"\", \"frame\": \"\\\"1\\\"\", \"size\": \"\\\"large\\\"\", \"__page__\": 0, \"colours\": \"{\\\"colour\\\": \\\"no\\\", \\\"__current_case__\\\": 0}\", \"strict\": \"\\\"False\\\"\", \"logoname\": \"\\\"+1 Frame\\\"\", \"ylabel\": \"\\\"\\\"\", \"input\": \"null\", \"stackheight\": \"\\\"100\\\"\", \"scalewidth\": \"\\\"True\\\"\", \"showyaxis\": \"\\\"True\\\"\", \"comp\": \"{\\\"mode\\\": \\\"equiprobable\\\", \\\"__current_case__\\\": 1}\", \"showxaxis\": \"\\\"True\\\"\", \"stackwidth\": \"\\\"40.0\\\"\", \"box\": \"\\\"False\\\"\", \"fineprint\": \"\\\"\\\"\", \"range\": \"{\\\"seqend\\\": \\\"16\\\", \\\"mode\\\": \\\"part\\\", \\\"__current_case__\\\": 1, \\\"seqstart\\\": \\\"6\\\"}\", \"xlabel\": \"\\\"\\\"\", \"errorbars\": \"\\\"True\\\"\", \"resolution\": \"\\\"96\\\"\", \"stacks\": \"\\\"20\\\"\"}",
84 "tool_version": "3",
85 "type": "tool",
86 "user_outputs": []
87 },
88 "3": {
89 "annotation": "",
90 "id": 3,
91 "input_connections": {
92 "input": {
93 "id": 0,
94 "output_name": "output"
95 }
96 },
97 "inputs": [],
98 "name": "Codon Logo",
99 "outputs": [
100 {
101 "name": "output",
102 "type": "pdf"
103 }
104 ],
105 "position": {
106 "left": 580,
107 "top": 493
108 },
109 "post_job_actions": {},
110 "tool_errors": null,
111 "tool_id": "codonlogo",
112 "tool_state": "{\"outformat\": \"\\\"pdf\\\"\", \"frame\": \"\\\"2\\\"\", \"size\": \"\\\"large\\\"\", \"__page__\": 0, \"colours\": \"{\\\"colour\\\": \\\"no\\\", \\\"__current_case__\\\": 0}\", \"strict\": \"\\\"False\\\"\", \"logoname\": \"\\\"+2 Frame\\\"\", \"ylabel\": \"\\\"\\\"\", \"input\": \"null\", \"stackheight\": \"\\\"100\\\"\", \"scalewidth\": \"\\\"True\\\"\", \"showyaxis\": \"\\\"True\\\"\", \"comp\": \"{\\\"mode\\\": \\\"equiprobable\\\", \\\"__current_case__\\\": 1}\", \"showxaxis\": \"\\\"True\\\"\", \"stackwidth\": \"\\\"40.0\\\"\", \"box\": \"\\\"False\\\"\", \"fineprint\": \"\\\"\\\"\", \"range\": \"{\\\"seqend\\\": \\\"16\\\", \\\"mode\\\": \\\"part\\\", \\\"__current_case__\\\": 1, \\\"seqstart\\\": \\\"6\\\"}\", \"xlabel\": \"\\\"\\\"\", \"errorbars\": \"\\\"True\\\"\", \"resolution\": \"\\\"96\\\"\", \"stacks\": \"\\\"20\\\"\"}",
113 "tool_version": "3",
114 "type": "tool",
115 "user_outputs": []
116 }
117 }
118 }