annotate report_clonality/naive_gene_freq.htm @ 25:94765af0db1f draft

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author davidvanzessen
date Thu, 09 Feb 2017 07:20:09 -0500
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1 <html>
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4 <meta http-equiv=Content-Type content="text/html; charset=windows-1252">
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5 <meta name=Generator content="Microsoft Word 14 (filtered)">
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6 <style>
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7 <!--
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8 /* Font Definitions */
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9 @font-face
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12 /* Style Definitions */
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25 font-family:"Calibri","sans-serif";}
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29 {margin-bottom:10.0pt;
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30 line-height:115%;}
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31 @page WordSection1
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32 {size:8.5in 11.0in;
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35 {page:WordSection1;}
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36 -->
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37 </style>
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38
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39 </head>
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40
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41 <body lang=EN-US>
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43 <div class=WordSection1>
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44
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45 <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align:
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46 justify;line-height:normal'><span lang=EN-GB style='font-size:12.0pt;
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47 font-family:"Times New Roman","serif"'>This tab gives information on the
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48 frequency of V, D and J gene usage. </span></p>
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49
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50 <p class=MsoNoSpacingCxSpMiddle style='text-align:justify'><b><span lang=EN-GB
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51 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Graphs</span></b></p>
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52
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53 <p class=MsoNormalCxSpFirst style='margin-bottom:0in;margin-bottom:.0001pt;
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54 text-align:justify;line-height:normal'><u><span lang=EN-GB style='font-size:
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55 12.0pt;font-family:"Times New Roman","serif"'>Distribution of V gene families</span></u></p>
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56
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57 <p class=MsoNormalCxSpMiddle style='margin-bottom:0in;margin-bottom:.0001pt;
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58 text-align:justify;line-height:normal'><a name="OLE_LINK123"></a><a
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59 name="OLE_LINK122"></a><a name="OLE_LINK121"><span lang=EN-GB style='font-size:
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60 12.0pt;font-family:"Times New Roman","serif"'>Bar graph showing the frequency
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61 of V gene family usage in all uploaded donors. </span></a></p>
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62
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63 <p class=MsoNormalCxSpMiddle style='margin-bottom:0in;margin-bottom:.0001pt;
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64 text-align:justify;line-height:normal'><u><span lang=EN-GB style='font-size:
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65 12.0pt;font-family:"Times New Roman","serif"'>Relative frequency of V gene
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66 usage</span></u></p>
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67
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68 <p class=MsoNormalCxSpLast style='margin-bottom:0in;margin-bottom:.0001pt;
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69 text-align:justify;line-height:normal'><a name="OLE_LINK126"></a><a
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70 name="OLE_LINK125"></a><a name="OLE_LINK124"><span lang=EN-GB style='font-size:
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71 12.0pt;font-family:"Times New Roman","serif"'>Bar graph showing the frequency
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72 of V genes in all uploaded donors. The order of the V genes on the x-axis can
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73 be altered by altering the “<span style='color:black;background:white'>Order of
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74 V(D)J genes in graphs” filter on the main page of the Immune repertoire
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75 pipeline.</span></span></a></p>
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76
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77 <p class=MsoNoSpacingCxSpLast style='text-align:justify'><a name="OLE_LINK129"></a><a
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78 name="OLE_LINK128"></a><a name="OLE_LINK127"><u><span lang=EN-GB
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79 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Relative
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80 frequency of D gene usage</span></u></a></p>
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81
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82 <p class=MsoNormalCxSpFirst style='margin-bottom:0in;margin-bottom:.0001pt;
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83 text-align:justify;line-height:normal'><span lang=EN-GB style='font-size:12.0pt;
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84 font-family:"Times New Roman","serif"'>Bar graph showing the frequency of D
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85 genes in all uploaded donors. The order of the D genes on the x-axis can be
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86 altered by altering the “<span style='color:black;background:white'>Order of
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87 V(D)J genes in graphs” filter on the main page of the Immune repertoire
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88 pipeline.</span></span></p>
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89
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90 <p class=MsoNoSpacing style='text-align:justify'><u><span lang=EN-GB
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91 style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Relative
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92 frequency of J gene usage</span></u></p>
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93
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94 <p class=MsoNormalCxSpFirst style='margin-bottom:0in;margin-bottom:.0001pt;
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95 text-align:justify;line-height:normal'><span lang=EN-GB style='font-size:12.0pt;
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96 font-family:"Times New Roman","serif"'>Bar graph showing the frequency of J
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97 genes in all uploaded donors. The order of the J genes on the x-axis can be
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98 altered by altering the “<span style='color:black;background:white'>Order of
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99 V(D)J genes in graphs” filter on the main page of the Immune repertoire
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100 pipeline.</span></span></p>
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101
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102 </div>
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103
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104 </body>
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105
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106 </html>