--- a/igblast/igblast.sh	Fri Dec 08 06:32:16 2017 -0500
+++ b/igblast/igblast.sh	Mon Jan 28 09:37:41 2019 -0500
@@ -24,7 +24,5 @@
 echo "$input $species $locus $output"
 
 java -Xmx16G -jar $IGBLASTWRP/igblastwrp.jar -p 4 -S $species -R $locus ${input} $PWD/blasted_output 2>&1
-#java -Xmx64G -jar $dir/igblastwrp.jar -p 4 -S $species -R $locus ${input} $PWD/blasted_output 2>&1
-#java -Xmx64G -jar $dir/migmap-1.0.1.jar -p 4 -S "$species" -R $locus ${input} $PWD/blasted_output 2>&1
 
 Rscript --verbose $dir/igblast.r "$PWD/blasted_output.L2.txt" "$output" 2>&1