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diff report_clonality/naive_gene_freq.htm @ 18:5d11c9139a55 draft

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author davidvanzessen
date Wed, 21 Dec 2016 11:53:03 -0500
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children b539aeb75980
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/report_clonality/naive_gene_freq.htm	Wed Dec 21 11:53:03 2016 -0500
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+<html>
+
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=windows-1252">
+<meta name=Generator content="Microsoft Word 14 (filtered)">
+<style>
+<!--
+ /* Font Definitions */
+ @font-face
+	{font-family:Calibri;
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+ /* Style Definitions */
+ p.MsoNormal, li.MsoNormal, div.MsoNormal
+	{margin-top:0in;
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+</style>
+
+</head>
+
+<body lang=EN-US>
+
+<div class=WordSection1>
+
+<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align:
+justify;line-height:normal'><span lang=EN-GB style='font-size:12.0pt;
+font-family:"Times New Roman","serif"'>This tab gives information on the
+frequency of V, D and J gene usage. </span></p>
+
+<p class=MsoNoSpacingCxSpMiddle style='text-align:justify'><b><span lang=EN-GB
+style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Graphs</span></b></p>
+
+<p class=MsoNormalCxSpFirst style='margin-bottom:0in;margin-bottom:.0001pt;
+text-align:justify;line-height:normal'><u><span lang=EN-GB style='font-size:
+12.0pt;font-family:"Times New Roman","serif"'>Distribution of V gene families</span></u></p>
+
+<p class=MsoNormalCxSpMiddle style='margin-bottom:0in;margin-bottom:.0001pt;
+text-align:justify;line-height:normal'><a name="OLE_LINK123"></a><a
+name="OLE_LINK122"></a><a name="OLE_LINK121"><span lang=EN-GB style='font-size:
+12.0pt;font-family:"Times New Roman","serif"'>Bar graph showing the frequency
+of V gene family usage in all uploaded donors. </span></a></p>
+
+<p class=MsoNormalCxSpMiddle style='margin-bottom:0in;margin-bottom:.0001pt;
+text-align:justify;line-height:normal'><u><span lang=EN-GB style='font-size:
+12.0pt;font-family:"Times New Roman","serif"'>Relative frequency of V gene
+usage</span></u></p>
+
+<p class=MsoNormalCxSpLast style='margin-bottom:0in;margin-bottom:.0001pt;
+text-align:justify;line-height:normal'><a name="OLE_LINK126"></a><a
+name="OLE_LINK125"></a><a name="OLE_LINK124"><span lang=EN-GB style='font-size:
+12.0pt;font-family:"Times New Roman","serif"'>Bar graph showing the frequency
+of V genes in all uploaded donors. The order of the V genes on the x-axis can
+be altered by altering the “<span style='color:black;background:white'>Order of
+V(D)J genes in graphs” filter on the main page of the Immune repertoire
+pipeline.</span></span></a></p>
+
+<p class=MsoNoSpacingCxSpLast style='text-align:justify'><a name="OLE_LINK129"></a><a
+name="OLE_LINK128"></a><a name="OLE_LINK127"><u><span lang=EN-GB
+style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Relative
+frequency of D gene usage</span></u></a></p>
+
+<p class=MsoNormalCxSpFirst style='margin-bottom:0in;margin-bottom:.0001pt;
+text-align:justify;line-height:normal'><span lang=EN-GB style='font-size:12.0pt;
+font-family:"Times New Roman","serif"'>Bar graph showing the frequency of D
+genes in all uploaded donors. The order of the D genes on the x-axis can be
+altered by altering the “<span style='color:black;background:white'>Order of
+V(D)J genes in graphs” filter on the main page of the Immune repertoire
+pipeline.</span></span></p>
+
+<p class=MsoNoSpacing style='text-align:justify'><u><span lang=EN-GB
+style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Relative
+frequency of J gene usage</span></u></p>
+
+<p class=MsoNormalCxSpFirst style='margin-bottom:0in;margin-bottom:.0001pt;
+text-align:justify;line-height:normal'><span lang=EN-GB style='font-size:12.0pt;
+font-family:"Times New Roman","serif"'>Bar graph showing the frequency of J
+genes in all uploaded donors. The order of the J genes on the x-axis can be
+altered by altering the “<span style='color:black;background:white'>Order of
+V(D)J genes in graphs” filter on the main page of the Immune repertoire
+pipeline.</span></span></p>
+
+</div>
+
+</body>
+
+</html>