Mercurial > repos > davidvanzessen > argalaxy_tools

diff report_clonality/naive_junction.htm @ 54:81b3eb11ed2c draft

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"planemo upload commit 6c0195cc4de6a34e2c46d875be4fc2157a21cdf6"
author rhpvorderman
date Tue, 16 Nov 2021 15:42:32 +0000
parents 124b7fd92a3e
children 4c6df851e262
line wrap: on
line diff
--- a/report_clonality/naive_junction.htm	Thu Feb 25 13:39:50 2021 +0000
+++ b/report_clonality/naive_junction.htm	Tue Nov 16 15:42:32 2021 +0000
@@ -1,206 +1,206 @@
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+<p class=MsoNormal style='text-align:justify'><b><u><span style='font-size:
+12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Junction
+analysis tab </span></u></b></p>
+
+<p class=MsoNormal style='text-align:justify'><b><span style='font-size:12.0pt;
+line-height:115%;font-family:"Times New Roman","serif"'>Tables:</span></b></p>
+
+<p class=MsoNormal style='text-align:justify'><span style='font-size:12.0pt;
+line-height:115%;font-family:"Times New Roman","serif"'>The unique
+rearrangements are separated in sequences that contain <span class=GramE>both a</span>
+V, D and J gene and sequences that contain only a V and J gene.</span></p>
+
+<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align:
+justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt;
+font-family:"Times New Roman","serif";mso-ansi-language:EN-GB'>Productive mean
+tables<o:p></o:p></span></u></p>
+
+<p class=MsoNormal style='text-align:justify'><span class=GramE><span
+style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports
+for each donor the number of productive sequences and the mean number of
+deletions, N-nucleotides and P-nucleotides.</span></span><span
+style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>
+For explanation about the different deletions and N and P nucleotides see
+figure above. </span></p>
+
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+justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt;
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+mean table<o:p></o:p></span></u></p>
+
+<p class=MsoNormal style='text-align:justify'><span class=GramE><span
+style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports
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+deletions, N-nucleotides and P-nucleotides.</span></span><span
+style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>
+For explanation about the different deletions and N and P nucleotides see
+figure above. </span></p>
+
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+justify;line-height:normal'><u><span lang=EN-GB style='font-size:12.0pt;
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+
+<p class=MsoNormal style='text-align:justify'><span class=GramE><span
+style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports
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+deletions, N-nucleotides and P-nucleotides.</span></span><span
+style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>
+For explanation about the different deletions and N and P nucleotides see
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+
+<p class=MsoNormal style='text-align:justify'><span class=GramE><span
+style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Reports
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+deletions, N-nucleotides and P-nucleotides.</span></span><span
+style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>
+For explanation about the different deletions and N and P nucleotides see
+figure above. </span></p>
+
+<p class=MsoNormal>&nbsp;</p>
+
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+
+</body>
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