Mercurial > repos > davidvanzessen > argalaxy_tools

diff report_clonality/r_wrapper.sh @ 1:90a05ff900db draft

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Uploaded
author davidvanzessen
date Mon, 05 Sep 2016 04:46:06 -0400
parents afe85eb6572e
children 4f8a1d121384
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line diff
--- a/report_clonality/r_wrapper.sh	Mon Aug 29 05:41:20 2016 -0400
+++ b/report_clonality/r_wrapper.sh	Mon Sep 05 04:46:06 2016 -0400
@@ -54,6 +54,10 @@
 cp $dir/circos/* $outputDir/circos/
 CIRCOSTOOLS="/data/galaxy/galaxy-dist/toolsheddependencies/circos/0.64/saskia-hiltemann/cg_circos_plots/bbfdd52d64fd/circos-tools-0.21/tools"
 CIRCOSDIR="/data/galaxy/galaxy-dist/toolsheddependencies/circos/0.64/saskia-hiltemann/cg_circos_plots/bbfdd52d64fd/bin/"
+
+CIRCOSTOOLS="/home/galaxy/circos/circos-tools-0.22/tools"
+CIRCOSDIR="/home/galaxy/Anaconda3/bin"
+
 USECIRCOS="no"
 if [ -d "$CIRCOSDIR" ]; then
 	USECIRCOS="yes"