Mercurial > repos > davidvanzessen > argalaxy_tools
view report_clonality/naive_gene_freq.htm @ 18:5d11c9139a55 draft
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author | davidvanzessen |
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date | Wed, 21 Dec 2016 11:53:03 -0500 |
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children | b539aeb75980 |
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<html> <head> <meta http-equiv=Content-Type content="text/html; charset=windows-1252"> <meta name=Generator content="Microsoft Word 14 (filtered)"> <style> <!-- /* Font Definitions */ @font-face {font-family:Calibri; panose-1:2 15 5 2 2 2 4 3 2 4;} /* Style Definitions */ p.MsoNormal, li.MsoNormal, div.MsoNormal {margin-top:0in; margin-right:0in; margin-bottom:10.0pt; margin-left:0in; line-height:115%; font-size:11.0pt; font-family:"Calibri","sans-serif";} p.MsoNoSpacing, li.MsoNoSpacing, div.MsoNoSpacing {margin:0in; margin-bottom:.0001pt; font-size:11.0pt; font-family:"Calibri","sans-serif";} .MsoChpDefault {font-family:"Calibri","sans-serif";} .MsoPapDefault {margin-bottom:10.0pt; line-height:115%;} @page WordSection1 {size:8.5in 11.0in; margin:1.0in 1.0in 1.0in 1.0in;} div.WordSection1 {page:WordSection1;} --> </style> </head> <body lang=EN-US> <div class=WordSection1> <p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align: justify;line-height:normal'><span lang=EN-GB style='font-size:12.0pt; font-family:"Times New Roman","serif"'>This tab gives information on the frequency of V, D and J gene usage. </span></p> <p class=MsoNoSpacingCxSpMiddle style='text-align:justify'><b><span lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Graphs</span></b></p> <p class=MsoNormalCxSpFirst style='margin-bottom:0in;margin-bottom:.0001pt; text-align:justify;line-height:normal'><u><span lang=EN-GB style='font-size: 12.0pt;font-family:"Times New Roman","serif"'>Distribution of V gene families</span></u></p> <p class=MsoNormalCxSpMiddle style='margin-bottom:0in;margin-bottom:.0001pt; text-align:justify;line-height:normal'><a name="OLE_LINK123"></a><a name="OLE_LINK122"></a><a name="OLE_LINK121"><span lang=EN-GB style='font-size: 12.0pt;font-family:"Times New Roman","serif"'>Bar graph showing the frequency of V gene family usage in all uploaded donors. </span></a></p> <p class=MsoNormalCxSpMiddle style='margin-bottom:0in;margin-bottom:.0001pt; text-align:justify;line-height:normal'><u><span lang=EN-GB style='font-size: 12.0pt;font-family:"Times New Roman","serif"'>Relative frequency of V gene usage</span></u></p> <p class=MsoNormalCxSpLast style='margin-bottom:0in;margin-bottom:.0001pt; text-align:justify;line-height:normal'><a name="OLE_LINK126"></a><a name="OLE_LINK125"></a><a name="OLE_LINK124"><span lang=EN-GB style='font-size: 12.0pt;font-family:"Times New Roman","serif"'>Bar graph showing the frequency of V genes in all uploaded donors. The order of the V genes on the x-axis can be altered by altering the “<span style='color:black;background:white'>Order of V(D)J genes in graphs” filter on the main page of the Immune repertoire pipeline.</span></span></a></p> <p class=MsoNoSpacingCxSpLast style='text-align:justify'><a name="OLE_LINK129"></a><a name="OLE_LINK128"></a><a name="OLE_LINK127"><u><span lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Relative frequency of D gene usage</span></u></a></p> <p class=MsoNormalCxSpFirst style='margin-bottom:0in;margin-bottom:.0001pt; text-align:justify;line-height:normal'><span lang=EN-GB style='font-size:12.0pt; font-family:"Times New Roman","serif"'>Bar graph showing the frequency of D genes in all uploaded donors. The order of the D genes on the x-axis can be altered by altering the “<span style='color:black;background:white'>Order of V(D)J genes in graphs” filter on the main page of the Immune repertoire pipeline.</span></span></p> <p class=MsoNoSpacing style='text-align:justify'><u><span lang=EN-GB style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Relative frequency of J gene usage</span></u></p> <p class=MsoNormalCxSpFirst style='margin-bottom:0in;margin-bottom:.0001pt; text-align:justify;line-height:normal'><span lang=EN-GB style='font-size:12.0pt; font-family:"Times New Roman","serif"'>Bar graph showing the frequency of J genes in all uploaded donors. The order of the J genes on the x-axis can be altered by altering the “<span style='color:black;background:white'>Order of V(D)J genes in graphs” filter on the main page of the Immune repertoire pipeline.</span></span></p> </div> </body> </html>