view report_clonality/naive_gene_freq.htm @ 20:9185c3dfc679 draft

Uploaded
author davidvanzessen
date Fri, 27 Jan 2017 03:44:18 -0500
parents 5d11c9139a55
children b539aeb75980
line wrap: on
line source

<html>

<head>
<meta http-equiv=Content-Type content="text/html; charset=windows-1252">
<meta name=Generator content="Microsoft Word 14 (filtered)">
<style>
<!--
 /* Font Definitions */
 @font-face
	{font-family:Calibri;
	panose-1:2 15 5 2 2 2 4 3 2 4;}
 /* Style Definitions */
 p.MsoNormal, li.MsoNormal, div.MsoNormal
	{margin-top:0in;
	margin-right:0in;
	margin-bottom:10.0pt;
	margin-left:0in;
	line-height:115%;
	font-size:11.0pt;
	font-family:"Calibri","sans-serif";}
p.MsoNoSpacing, li.MsoNoSpacing, div.MsoNoSpacing
	{margin:0in;
	margin-bottom:.0001pt;
	font-size:11.0pt;
	font-family:"Calibri","sans-serif";}
.MsoChpDefault
	{font-family:"Calibri","sans-serif";}
.MsoPapDefault
	{margin-bottom:10.0pt;
	line-height:115%;}
@page WordSection1
	{size:8.5in 11.0in;
	margin:1.0in 1.0in 1.0in 1.0in;}
div.WordSection1
	{page:WordSection1;}
-->
</style>

</head>

<body lang=EN-US>

<div class=WordSection1>

<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;text-align:
justify;line-height:normal'><span lang=EN-GB style='font-size:12.0pt;
font-family:"Times New Roman","serif"'>This tab gives information on the
frequency of V, D and J gene usage. </span></p>

<p class=MsoNoSpacingCxSpMiddle style='text-align:justify'><b><span lang=EN-GB
style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Graphs</span></b></p>

<p class=MsoNormalCxSpFirst style='margin-bottom:0in;margin-bottom:.0001pt;
text-align:justify;line-height:normal'><u><span lang=EN-GB style='font-size:
12.0pt;font-family:"Times New Roman","serif"'>Distribution of V gene families</span></u></p>

<p class=MsoNormalCxSpMiddle style='margin-bottom:0in;margin-bottom:.0001pt;
text-align:justify;line-height:normal'><a name="OLE_LINK123"></a><a
name="OLE_LINK122"></a><a name="OLE_LINK121"><span lang=EN-GB style='font-size:
12.0pt;font-family:"Times New Roman","serif"'>Bar graph showing the frequency
of V gene family usage in all uploaded donors. </span></a></p>

<p class=MsoNormalCxSpMiddle style='margin-bottom:0in;margin-bottom:.0001pt;
text-align:justify;line-height:normal'><u><span lang=EN-GB style='font-size:
12.0pt;font-family:"Times New Roman","serif"'>Relative frequency of V gene
usage</span></u></p>

<p class=MsoNormalCxSpLast style='margin-bottom:0in;margin-bottom:.0001pt;
text-align:justify;line-height:normal'><a name="OLE_LINK126"></a><a
name="OLE_LINK125"></a><a name="OLE_LINK124"><span lang=EN-GB style='font-size:
12.0pt;font-family:"Times New Roman","serif"'>Bar graph showing the frequency
of V genes in all uploaded donors. The order of the V genes on the x-axis can
be altered by altering the “<span style='color:black;background:white'>Order of
V(D)J genes in graphs” filter on the main page of the Immune repertoire
pipeline.</span></span></a></p>

<p class=MsoNoSpacingCxSpLast style='text-align:justify'><a name="OLE_LINK129"></a><a
name="OLE_LINK128"></a><a name="OLE_LINK127"><u><span lang=EN-GB
style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Relative
frequency of D gene usage</span></u></a></p>

<p class=MsoNormalCxSpFirst style='margin-bottom:0in;margin-bottom:.0001pt;
text-align:justify;line-height:normal'><span lang=EN-GB style='font-size:12.0pt;
font-family:"Times New Roman","serif"'>Bar graph showing the frequency of D
genes in all uploaded donors. The order of the D genes on the x-axis can be
altered by altering the “<span style='color:black;background:white'>Order of
V(D)J genes in graphs” filter on the main page of the Immune repertoire
pipeline.</span></span></p>

<p class=MsoNoSpacing style='text-align:justify'><u><span lang=EN-GB
style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Relative
frequency of J gene usage</span></u></p>

<p class=MsoNormalCxSpFirst style='margin-bottom:0in;margin-bottom:.0001pt;
text-align:justify;line-height:normal'><span lang=EN-GB style='font-size:12.0pt;
font-family:"Times New Roman","serif"'>Bar graph showing the frequency of J
genes in all uploaded donors. The order of the J genes on the x-axis can be
altered by altering the “<span style='color:black;background:white'>Order of
V(D)J genes in graphs” filter on the main page of the Immune repertoire
pipeline.</span></span></p>

</div>

</body>

</html>