Mercurial > repos > davidvanzessen > argalaxy_tools

view tool_dependencies.xml @ 0:afe85eb6572e draft

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author davidvanzessen
date Mon, 29 Aug 2016 05:41:20 -0400
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<?xml version="1.0"?>
<tool_dependency>
    <package name="igblastwrp" version="0.6">
        <install version="1.0">
            <actions>
                <action type="download_by_url">https://github.com/mikessh/higblast/releases/download/v0.6/igblastwrapper_linux64.tar.gz</action>
                <action type="move_file">
                    <source>bin</source>
                    <destination>$INSTALL_DIR/</destination>
                </action>
                <action type="move_file">
                    <source>data</source>
                    <destination>$INSTALL_DIR/</destination>
                </action>
                <action type="move_file">
                    <source>igblastwrp.jar</source>
                    <destination>$INSTALL_DIR/</destination>
                </action>
                <action type="set_environment">
                    <environment_variable action="set_to" name="IGBLASTWRP">$INSTALL_DIR/</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
Downloads https://github.com/mikessh/higblast/
        </readme>
    </package>
    <package name="weblogo" version="3.3">
      <repository changeset_revision="648e4b32f15c" name="package_weblogo_3_3" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <!--
    <package name="circostools" version="0.20">
      <repository name="package_circostools_0_20" owner="iuc" />
    </package>
    -->
</tool_dependency>