Mercurial > repos > davidvanzessen > shm_csr

annotate tests/validation_data/shm_overview.txt @ 83:729738462297 draft

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"planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
author rhpvorderman
date Wed, 15 Sep 2021 12:24:06 +0000
parents
children 6809c63d9161
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729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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1 IGA.x IGA.y IGA.z IGA1.x IGA1.y IGA1.z IGA2.x IGA2.y IGA2.z IGG.x IGG.y IGG.z IGG1.x IGG1.y IGG1.z IGG2.x IGG2.y IGG2.z IGG3.x IGG3.y IGG3.z IGG4.x IGG4.y IGG4.z IGM.x IGM.y IGM.z IGE.x IGE.y IGE.z all.x all.y all.z un.x un.y un.z
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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2 Number of Mutations (%) 17977 195251 9.2 12223 126298 9.7 5754 68953 8.3 9036 99835 9.1 5492 58332 9.4 2777 31881 8.7 388 5570 7 379 4052 9.4 0 213 0 0 0 0 27013 295299 9.1 3486 40247 8.7
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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3 Median of Number of Mutations (%) 19 213 8.9 20 213 9.4 16.5 213 7.8 18 213 8.5 18 213 8.5 17 213 8.1 13.5 213 6.3 18 213 8.5 0 213 0 0 0 0 18 213 8.5 16 213 7.5
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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4 Transitions (%) 10318 17977 57.4 7067 12223 57.8 3251 5754 56.5 5045 9036 55.8 3062 5492 55.8 1573 2777 56.6 211 388 54.4 199 379 52.5 0 0 0 0 0 15363 27013 56.9 1983 3486 56.9
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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5 Transversions (%) 7659 17977 42.6 5156 12223 42.2 2503 5754 43.5 3991 9036 44.2 2430 5492 44.2 1204 2777 43.4 177 388 45.6 180 379 47.5 0 0 0 0 0 11650 27013 43.1 1503 3486 43.1
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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6 Transitions at G C (%) 5933 10299 57.6 4111 7056 58.3 1822 3243 56.2 2836 5066 56 1736 3093 56.1 885 1567 56.5 112 202 55.4 103 204 50.5 0 0 0 0 0 8769 15365 57.1 1111 1968 56.5
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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7 Targeting of G C (%) 10299 17977 57.3 7056 12223 57.7 3243 5754 56.4 5066 9036 56.1 3093 5492 56.3 1567 2777 56.4 202 388 52.1 204 379 53.8 0 0 0 0 0 15365 27013 56.9 1968 3486 56.5
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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8 Transitions at A T (%) 4385 7678 57.1 2956 5167 57.2 1429 2511 56.9 2209 3970 55.6 1326 2399 55.3 688 1210 56.9 99 186 53.2 96 175 54.9 0 0 0 0 0 6594 11648 56.6 872 1518 57.4
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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9 Targeting of A T (%) 7678 17977 42.7 5167 12223 42.3 2511 5754 43.6 3970 9036 43.9 2399 5492 43.7 1210 2777 43.6 186 388 47.9 175 379 46.2 0 0 0 0 0 11648 27013 43.1 1518 3486 43.5
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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10 FR R/S (ratio) 7123 3750 1.9 4909 2586 1.9 2214 1164 1.9 3622 1847 2 2246 1148 2 1045 560 1.9 164 68 2.4 167 71 2.4 0 0 0 0 0 10745 5597 1.9 1336 719 1.9
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
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11 CDR R/S (ratio) 5901 1203 4.9 3873 855 4.5 2028 348 5.8 2962 605 4.9 1717 381 4.5 998 174 5.7 126 30 4.2 121 20 6 0 0 0 0 0 8863 1808 4.9 1208 223 5.4
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
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12 nt in FR 151127 195251 77.4 97738 126298 77.4 53389 68953 77.4 77252 99835 77.4 45155 58332 77.4 24674 31881 77.4 4289 5570 77 3134 4052 77.3 165 213 77.5 0 0 0 228544 295299 77.4 31179 40247 77.5
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
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13 nt in CDR 44124 195251 22.6 28560 126298 22.6 15564 68953 22.6 22583 99835 22.6 13177 58332 22.6 7207 31881 22.6 1281 5570 23 918 4052 22.7 48 213 22.5 0 0 0 66755 295299 22.6 9068 40247 22.5
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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14 Tandems/Expected (ratio) 2438 2262.33 1.08 1680 1601.93 1.05 758 660.41 1.15 1212 1128.79 1.07 769 710.06 1.08 357 321.62 1.11 43 45.72 0.94 43 51.4 0.84 0 0 0 0 0 0 3650 3391.13 1.08 482 411.6 1.17
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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15 RGYW (%) 3163 17977 17.6 2186 12223 17.9 978 5754 17 1524 9036 16.9 911 5492 16.6 485 2777 17.5 63 388 16.2 65 379 17.2 0 0 0 0 0 0 4687 27013 17.4 602 3486 17.3
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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16 WRCY (%) 2984 17977 16.6 2060 12223 16.9 924 5754 16.1 1445 9036 16 888 5492 16.2 455 2777 16.4 52 388 13.4 50 379 13.2 0 0 0 0 0 0 4429 27013 16.4 614 3486 17.6
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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17 WA (%) 2610 17977 14.5 1715 12223 14 895 5754 15.6 1420 9036 15.7 859 5492 15.6 433 2777 15.6 67 388 17.3 61 379 16.1 0 0 0 0 0 0 4030 27013 14.9 540 3486 15.5
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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18 TW (%) 1561 17977 8.7 1044 12223 8.5 517 5754 9 818 9036 9.1 474 5492 8.6 265 2777 9.5 34 388 8.8 46 379 12.1 0 0 0 0 0 0 2379 27013 8.8 330 3486 9.5
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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19 A 49123 195251 25.16 31648 126298 25.06 17475 68953 25.34 24685 99835 24.73 14372 58332 24.64 7945 31881 24.92 1399 5570 25.12 969 4052 23.91 58 213 27.23 0 0 0 73866 295299 25.01 10122 40247 25.15
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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20 C 48130 195251 24.65 31276 126298 24.76 16854 68953 24.44 25076 99835 25.12 14646 58332 25.11 8009 31881 25.12 1389 5570 24.94 1032 4052 25.47 51 213 23.94 0 0 0 73257 295299 24.81 9848 40247 24.47
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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21 T 43599 195251 22.33 28348 126298 22.45 15251 68953 22.12 22415 99835 22.45 13167 58332 22.57 7087 31881 22.23 1243 5570 22.32 918 4052 22.66 47 213 22.07 0 0 0 66061 295299 22.37 8943 40247 22.22
729738462297 "planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
rhpvorderman
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22 G 54399 195251 27.86 35026 126298 27.73 19373 68953 28.1 27659 99835 27.7 16147 58332 27.68 8840 31881 27.73 1539 5570 27.63 1133 4052 27.96 57 213 26.76 0 0 0 82115 295299 27.81 11334 40247 28.16