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"planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
author rhpvorderman
date Wed, 15 Sep 2021 12:24:06 +0000
parents b6f9a640e098
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3 Somatic hypermutation and class switch recombination pipeline. 3 Somatic hypermutation and class switch recombination pipeline.
4 The docker version can be found [here](https://github.com/ErasmusMC-Bioinformatics/ARGalaxy-docker). 4 The docker version can be found [here](https://github.com/ErasmusMC-Bioinformatics/ARGalaxy-docker).
5 5
6 # Dependencies 6 # Dependencies
7 -------------------- 7 --------------------
8 [Python 2.7](https://www.python.org/) 8 [Python 3.7](https://www.python.org/)
9 [Change-O](https://changeo.readthedocs.io/en/version-0.4.4/) 9 [Change-O](https://changeo.readthedocs.io/en/version-0.4.4/)
10 [Baseline](http://selection.med.yale.edu/baseline/) 10 [Baseline](http://selection.med.yale.edu/baseline/)
11 [R data.table](https://cran.r-project.org/web/packages/data.table/data.table.pdf) 11 [R data.table](https://cran.r-project.org/web/packages/data.table/data.table.pdf)
12 [R ggplot2](https://cran.r-project.org/web/packages/ggplot2/ggplot2.pdf) 12 [R ggplot2](https://cran.r-project.org/web/packages/ggplot2/ggplot2.pdf)
13 [R reshape2](https://cran.r-project.org/web/packages/reshape/reshape.pdf) 13 [R reshape2](https://cran.r-project.org/web/packages/reshape/reshape.pdf)