Mercurial > repos > davidvanzessen > shm_csr

comparison shm_csr.xml @ 88:a84ac3ee87e1 draft

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"planemo upload commit 78d1fae87dbcf490e49a9f99e7a06de7328e16d4"
author rhpvorderman
date Wed, 27 Oct 2021 12:32:21 +0000
parents 64bbc6734ec7
children 3c9d4d976c47
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87:64bbc6734ec7 88:a84ac3ee87e1
15 <requirement type="package" version="6.0">unzip</requirement> 15 <requirement type="package" version="6.0">unzip</requirement>
16 <requirement type="package" version="4.4.18">bash</requirement> 16 <requirement type="package" version="4.4.18">bash</requirement>
17 <requirement type="package" version="1.34">tar</requirement> 17 <requirement type="package" version="1.34">tar</requirement>
18 <requirement type="package" version="5.39">file</requirement> 18 <requirement type="package" version="5.39">file</requirement>
19 <container type="docker">quay.io/rhpvorderman/mulled-v2-a2524529ff4c0254c944ff4606e926ca2e8b80d0:9fa3e7fda79c80bf1af596872bddd871913a2c1c-0</container> 19 <container type="docker">quay.io/rhpvorderman/mulled-v2-a2524529ff4c0254c944ff4606e926ca2e8b80d0:9fa3e7fda79c80bf1af596872bddd871913a2c1c-0</container>
20 <container type="singularity">docker://quay.io/rhpvorderman/mulled-v2-a2524529ff4c0254c944ff4606e926ca2e8b80d0:9fa3e7fda79c80bf1af596872bddd871913a2c1c-0</container>
20 </requirements> 21 </requirements>
21 <command interpreter="bash"> 22 <command interpreter="bash">
22 #if str ( $filter_unique.filter_unique_select ) == "remove": 23 #if str ( $filter_unique.filter_unique_select ) == "remove":
23 wrapper.sh $in_file custom $out_file $out_file.files_path "${in_file.name}" "-" $functionality $unique $naive_output_cond.naive_output $naive_output_ca $naive_output_cg $naive_output_cm $naive_output_ce $naive_output_all $filter_unique.filter_unique_select $filter_unique.filter_unique_clone_count $class_filter_cond.class_filter $empty_region_filter $fast 24 wrapper.sh $in_file custom $out_file $out_file.files_path "${in_file.name}" "-" $functionality $unique $naive_output_cond.naive_output $naive_output_ca $naive_output_cg $naive_output_cm $naive_output_ce $naive_output_all $filter_unique.filter_unique_select $filter_unique.filter_unique_clone_count $class_filter_cond.class_filter $empty_region_filter $fast
24 #else: 25 #else: