Mercurial > repos > davidvanzessen > shm_csr

comparison sequence_overview.r @ 45:b66e8946ba75 draft

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Uploaded
author davidvanzessen
date Wed, 12 Apr 2017 03:52:33 -0400
parents a24f8c93583a
children cfc9a442e59d
comparison
equal deleted inserted replaced
44:716622f5bb4f 45:b66e8946ba75
68 res = paste(res, tr(df[i,]), sep="") 68 res = paste(res, tr(df[i,]), sep="")
69 } 69 }
70 res = paste(res, "</table>") 70 res = paste(res, "</table>")
71 } 71 }
72 72
73 cat("<center><img src='data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAA8AAAAPCAYAAAA71pVKAAAAzElEQVQoka2TwQ2CQBBFpwTshw4ImW8ogJMlUIMmhNCDxgasAi50oSXA8XlAjCG7aqKTzGX/vsnM31mzR0gk7tTudO5MEizpzvQ4ryUSe408J3Xn+grE0p1rnpOamVmWsZG4rS+dzzAMsN8Hi9yyjI1JNGtxu4VxBJgLRLpoTKIPiW0LlwtUVRTubW2OBGUJu92cZRmdfbKQMAw8o+vi5v0fLorZ7Y9waGYJjsf38DJz0O1PsEQffOcv4Sa6YYfDDJ5Obzbsp93+5VfdATueO1fdLdI0AAAAAElFTkSuQmCC'> Please note that this tab is based on all sequences before filter unique sequences and the remove duplicates based on filters are applied. In this table only sequences according more than once are included. </center>", file=main.html, append=F) 73 cat("<center><img src='data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAA8AAAAPCAYAAAA71pVKAAAAzElEQVQoka2TwQ2CQBBFpwTshw4ImW8ogJMlUIMmhNCDxgasAi50oSXA8XlAjCG7aqKTzGX/vsnM31mzR0gk7tTudO5MEizpzvQ4ryUSe408J3Xn+grE0p1rnpOamVmWsZG4rS+dzzAMsN8Hi9yyjI1JNGtxu4VxBJgLRLpoTKIPiW0LlwtUVRTubW2OBGUJu92cZRmdfbKQMAw8o+vi5v0fLorZ7Y9waGYJjsf38DJz0O1PsEQffOcv4Sa6YYfDDJ5Obzbsp93+5VfdATueO1fdLdI0AAAAAElFTkSuQmCC'> Please note that this tab is based on all sequences before filter unique sequences and the remove duplicates based on filters are applied. In this table only sequences occuring more than once are included. </center>", file=main.html, append=F)
74 cat("<table border='1' class='pure-table pure-table-striped'>", file=main.html, append=T) 74 cat("<table border='1' class='pure-table pure-table-striped'>", file=main.html, append=T)
75 75
76 if(empty.region.filter == "leader"){ 76 if(empty.region.filter == "leader"){
77 cat("<caption>FR1+CDR1+FR2+CDR2+FR3+CDR3 sequences that show up more than once</caption>", file=main.html, append=T) 77 cat("<caption>FR1+CDR1+FR2+CDR2+FR3+CDR3 sequences that show up more than once</caption>", file=main.html, append=T)
78 } else if(empty.region.filter == "FR1"){ 78 } else if(empty.region.filter == "FR1"){