comparison tests/test_shm_csr.py @ 92:cf8ad181628f draft

planemo upload commit 36be3b053802693392f935e6619ba3f2b1704e3c
author rhpvorderman
date Mon, 12 Dec 2022 12:32:44 +0000
parents 6809c63d9161
children 8fcf31272f6e
comparison
equal deleted inserted replaced
91:f387cc1580c6 92:cf8ad181628f
67 naive_output_all = "None" 67 naive_output_all = "None"
68 filter_unique = "remove" 68 filter_unique = "remove"
69 filter_unique_count = '2' 69 filter_unique_count = '2'
70 class_filter = '70_70' 70 class_filter = '70_70'
71 empty_region_filter = 'FR1' 71 empty_region_filter = 'FR1'
72 fast = 'no' 72 # Skip baseline and changeo by default. These tools cannot be modified
73 # anyway and take most of the test time to execute. The environment
74 # variable can be set to "no" on the CI so the code path is tested
75 # at the time a PR is ready.
76 fast = os.environ.get("SHM_CSR_FAST", "yes")
73 cmd = [ 77 cmd = [
74 "bash", 78 "bash",
75 wrapper, 79 wrapper,
76 input, 80 input,
77 "custom", 81 "custom",