Mercurial > repos > davidvanzessen > shm_csr
diff shm_csr.xml @ 30:33a7c49d48a7 draft
Uploaded
author | davidvanzessen |
---|---|
date | Mon, 12 Dec 2016 05:19:58 -0500 |
parents | 80c4eebf7bc9 |
children | fe44a905aee9 |
line wrap: on
line diff
--- a/shm_csr.xml Thu Dec 08 04:51:09 2016 -0500 +++ b/shm_csr.xml Mon Dec 12 05:19:58 2016 -0500 @@ -122,19 +122,20 @@ *Remove unique:* - This filter consists of two different steps. - Step 1: removes all sequences of which the nucleotide sequence in the “analysed region” (see sequence starts at filter) occurs only once. (Sub)classes are not taken into account in this filter step. +This filter consists of two different steps. + +Step 1: removes all sequences of which the nucleotide sequence in the “analysed region” (see sequence starts at filter) occurs only once. (Sub)classes are not taken into account in this filter step. - Step 2: removes all duplicate sequences (sequences with the exact same nucleotide sequence in the analysed region and the same (sub)class). +Step 2: removes all duplicate sequences (sequences with the exact same nucleotide sequence in the analysed region and the same (sub)class). - .. class:: infomark +.. class:: infomark - Note: This means that sequences with the same nucleotide sequence but a different (sub)class will be included in the results of both (sub)classes. +Note: This means that sequences with the same nucleotide sequence but a different (sub)class will be included in the results of both (sub)classes. *Keep unique:* - Removes all duplicate sequences (sequences with the exact same nucleotide sequence in the analysed region and the same (sub)class). +Removes all duplicate sequences (sequences with the exact same nucleotide sequence in the analysed region and the same (sub)class). Example of the sequences that are included using either the “remove unique filter” or the “keep unique filter”