--- a/wrapper.sh	Thu Dec 08 04:51:09 2016 -0500
+++ b/wrapper.sh	Mon Dec 12 05:19:58 2016 -0500
@@ -410,27 +410,27 @@
 fi
 
 
-if [ -e $outdir/baseline.png ]
+if [ -e $outdir/baseline.pdf ]
 then
 	echo "<embed src='baseline.pdf' width='700px' height='1000px'>" >> $output
 fi
 
-if [ -e $outdir/baseline_IGA.png ]
+if [ -e $outdir/baseline_IGA.pdf ]
 then
 	echo "<embed src='baseline_IGA.pdf' width='700px' height='1000px'>" >> $output
 fi
 
-if [ -e $outdir/baseline_IGG.png ]
+if [ -e $outdir/baseline_IGG.pdf ]
 then
 	echo "<embed src='baseline_IGG.pdf' width='700px' height='1000px'>" >> $output
 fi
 
-if [ -e $outdir/baseline_IGM.png ]
+if [ -e $outdir/baseline_IGM.pdf ]
 then
 	echo "<embed src='baseline_IGM.pdf' width='700px' height='1000px'>" >> $output
 fi
 
-if [ -e $outdir/baseline_IGE.png ]
+if [ -e $outdir/baseline_IGE.pdf ]
 then
 	echo "<embed src='baseline_IGE.pdf' width='700px' height='1000px'>" >> $output
 fi
@@ -582,7 +582,7 @@
 echo "<tr><td>The data for the 'all' transition plot</td><td><a href='transitions_all_sum.txt' download='transitions_all_sum.txt' >Download</a></td></tr>" >> $output
 echo "<tr><td>The data for the 'IGA' transition plot</td><td><a href='transitions_IGA_sum.txt' download='transitions_all_sum.txt' >Download</a></td></tr>" >> $output
 echo "<tr><td>The data for the 'IGA1' transition plot</td><td><a href='transitions_IGA1_sum.txt' download='transitions_IGA1_sum.txt' >Download</a></td></tr>" >> $output
-echo "<tr><td>The data for the 'IGA1' transition plot</td><td><a href='transitions_IGA2_sum.txt' download='transitions_IGA2_sum.txt' >Download</a></td></tr>" >> $output
+echo "<tr><td>The data for the 'IGA2' transition plot</td><td><a href='transitions_IGA2_sum.txt' download='transitions_IGA2_sum.txt' >Download</a></td></tr>" >> $output
 echo "<tr><td>The data for the 'IGG' transition plot</td><td><a href='transitions_IGG_sum.txt' download='transitions_IGG_sum.txt' >Download</a></td></tr>" >> $output
 echo "<tr><td>The data for the 'IGG1' transition plot</td><td><a href='transitions_IGG1_sum.txt' download='transitions_IGG1_sum.txt' >Download</a></td></tr>" >> $output
 echo "<tr><td>The data for the 'IGG2' transition plot</td><td><a href='transitions_IGG2_sum.txt' download='transitions_IGG2_sum.txt' >Download</a></td></tr>" >> $output