--- a/baseline/script_imgt.py	Tue Dec 13 10:06:49 2016 -0500
+++ b/baseline/script_imgt.py	Thu Dec 15 09:21:54 2016 -0500
@@ -11,7 +11,7 @@
 args = parser.parse_args()
 
 refdic = dict()
-with open(args.ref, 'r') as ref:
+with open(args.ref, 'rU') as ref:
 	currentSeq = ""
 	currentId = ""
 	for line in ref:
@@ -37,13 +37,16 @@
 vPattern = re.compile("|".join(vPattern))
 
 def filterGene(s, pattern):
+	s1 = s[s.find(" ") + 1:]
+	return s1[:s1.find(" ")]
+	"""
     if type(s) is not str:
         return None
     res = pattern.search(s)
     if res:
         return res.group(0)
     return None
-
+	"""
 
 
 currentSeq = ""