Mercurial > repos > davidvanzessen > shm_csr

diff shm_csr.htm @ 90:6809c63d9161 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload commit fd64827ff6e63df008f6f50ddb8576ad2b1dbb26"
author rhpvorderman
date Tue, 25 Jan 2022 11:28:29 +0000
parents ba33b94637ca
children
line wrap: on
line diff
--- a/shm_csr.htm	Fri Nov 05 13:41:03 2021 +0000
+++ b/shm_csr.htm	Tue Jan 25 11:28:29 2022 +0000
@@ -1,7 +1,7 @@
 <html>
 
 <head>
-<meta http-equiv=Content-Type content="text/html; charset=windows-1252">
+<meta http-equiv=Content-Type content="text/html; charset=UTF-8">
 <meta name=Generator content="Microsoft Word 14 (filtered)">
 <style>
 <!--
@@ -49,7 +49,7 @@
 style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>The
 graphs in this tab give insight into the subclass distribution of IGG and IGA
 transcripts. </span><span lang=EN-GB style='font-size:12.0pt;line-height:115%;
-font-family:"Times New Roman","serif"'>Human Cµ, C&#945;, C&#947; and C&#949;
+font-family:"Times New Roman","serif"'>Human Cµ, C&#945;, C&#947; and C&#949;
 constant genes are assigned using a </span><span lang=EN-GB style='font-size:
 12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>custom script
 specifically designed for human (sub)class assignment in repertoire data as
@@ -58,11 +58,11 @@
 nucleotide chunks which overlap by 4 nucleotides. These overlapping chunks are
 then individually aligned in the right order to each input sequence. The
 percentage of the chunks identified in each rearrangement is calculated in the
-‘chunk hit percentage’. </span><span lang=EN-GB style='font-size:12.0pt;
+‘chunk hit percentage’. </span><span lang=EN-GB style='font-size:12.0pt;
 line-height:115%;font-family:"Times New Roman","serif"'>C&#945; and C&#947;
 subclasses are very homologous and only differ in a few nucleotides. To assign
 subclasses the </span><span lang=EN-GB style='font-size:12.0pt;line-height:
-115%;font-family:"Times New Roman","serif"'>‘nt hit percentage’ is calculated.
+115%;font-family:"Times New Roman","serif"'>‘nt hit percentage’ is calculated.
 This percentage indicates how well the chunks covering the subclass specific
 nucleotide match with the different subclasses. </span><span lang=EN-GB
 style='font-size:12.0pt;line-height:115%;font-family:"Times New Roman","serif"'>Information