diff conda_environment.yml @ 83:729738462297 draft

"planemo upload commit c0ffc68aec5836d5b20b543106493056a87edf57"
author rhpvorderman
date Wed, 15 Sep 2021 12:24:06 +0000
parents
children 4db34e32dd47
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/conda_environment.yml	Wed Sep 15 12:24:06 2021 +0000
@@ -0,0 +1,23 @@
+name: shm_csr
+channels:
+  - conda-forge
+  - bioconda
+  - defaults
+dependencies:
+  - python=3.7
+  - changeo=0.4.4
+  - biopython=1.72  # Higher versions break changeo
+  - unzip=6.0
+  - bash=4.4.18
+  - tar=1.34
+  - xlrd=1.2.0
+  - r-ggplot2=3.0.0
+  - r-reshape2=1.4.3
+  - r-scales=0.5.0
+  - r-seqinr=3.4_5
+  - r-data.table=1.11.4
+  - file=5.39
+  # Test dependencies below
+  - pytest
+  # Add planemo so tool can be uploaded
+  - planemo