Mercurial > repos > davidvanzessen > shm_csr

diff wrapper.sh @ 18:949a30f04d9b draft

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author davidvanzessen
date Mon, 28 Nov 2016 04:41:22 -0500
parents 4e596473c25c
children ba2511ebd36a
line wrap: on
line diff
--- a/wrapper.sh	Thu Nov 24 10:24:19 2016 -0500
+++ b/wrapper.sh	Mon Nov 28 04:41:22 2016 -0500
@@ -651,10 +651,15 @@
 
 if [[ "$naive_output" == "yes" ]]
 then
-	cp $outdir/new_IMGT_IGA.txz ${naive_output_ca}
-	cp $outdir/new_IMGT_IGG.txz ${naive_output_cg}
-	cp $outdir/new_IMGT_IGM.txz ${naive_output_cm}
-	cp $outdir/new_IMGT_IGE.txz ${naive_output_ce}
+	if [[ "${class_filter}" == "101_101" ]]
+	then
+		cp $outdir/new_IMGT.txz ${naive_output_ca}
+	else
+		cp $outdir/new_IMGT_IGA.txz ${naive_output_ca}
+		cp $outdir/new_IMGT_IGG.txz ${naive_output_cg}
+		cp $outdir/new_IMGT_IGM.txz ${naive_output_cm}
+		cp $outdir/new_IMGT_IGE.txz ${naive_output_ce}
+	fi
 fi
 
 echo "</table>" >> $outdir/base_overview.html