Mercurial > repos > davidvanzessen > shm_csr

diff change_o/define_clones.sh @ 79:98e3fecedd2b draft

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Uploaded
author davidvanzessen
date Tue, 01 Sep 2020 16:03:44 -0400
parents aff3ba86ef7a
children
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--- a/change_o/define_clones.sh	Mon Aug 31 11:20:08 2020 -0400
+++ b/change_o/define_clones.sh	Tue Sep 01 16:03:44 2020 -0400
@@ -21,7 +21,7 @@
 	output=${10}
 	output2=${11}
 	
-	python3 $dir/DefineClones.py -d $PWD/input.tab --nproc 4 --outdir $PWD/outdir --outname output --mode $mode --act $act --model $model --dist $dist --norm $norm --sym $sym --link $link
+	DefineClones.py -d $PWD/input.tab --nproc 4 --outdir $PWD/outdir --outname output --mode $mode --act $act --model $model --dist $dist --norm $norm --sym $sym --link $link
 	
 	Rscript $dir/define_clones.r $PWD/outdir/output_clone-pass.tab $output2 2>&1
 else
@@ -29,7 +29,7 @@
 	output=$4
 	output2=$5
 	
-	python3 $dir/DefineClones.py hclust -d $PWD/input.tab --nproc 4 --outdir $PWD/outdir --outname output --method $method
+	DefineClones.py hclust -d $PWD/input.tab --nproc 4 --outdir $PWD/outdir --outname output --method $method
 	
 	Rscript $dir/define_clones.r $PWD/outdir/output_clone-pass.tab $output2 2>&1
 fi