Mercurial > repos > davidvanzessen > shm_csr

view change_o/select_first_in_clone.r @ 88:a84ac3ee87e1 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload commit 78d1fae87dbcf490e49a9f99e7a06de7328e16d4"
author rhpvorderman
date Wed, 27 Oct 2021 12:32:21 +0000
parents 6cd12c71c3d3
children
line wrap: on
line source

args <- commandArgs(trailingOnly = TRUE)

input.file = args[1]
output.file = args[2]

print("select_in_first_clone.r")
print(input.file)
print(output.file)

input = read.table(input.file, header=T, sep="\t", fill=T, stringsAsFactors=F, quote="")

input = input[!duplicated(input$CLONE),]

names(input)[1] = "Sequence.ID"

write.table(input, output.file, quote=F, sep="\t", row.names=F, col.names=T, na="")