Mercurial > repos > dcouvin > getsequenceinfo
annotate getSequenceInfo.sh @ 0:19ae17458c14 draft default tip
Uploaded
| author | dcouvin |
|---|---|
| date | Wed, 15 Sep 2021 21:35:09 +0000 |
| parents | |
| children |
| rev | line source |
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| 0 | 1 #!/bin/bash |
| 2 | |
| 3 dir=$1 | |
| 4 availableKingdoms=$2 | |
| 5 assemblylevel=$3 | |
| 6 species=$4 | |
| 7 quantity=$5 | |
| 8 output=$6 | |
| 9 #enaFtpServor=$7 | |
| 10 | |
| 11 directory=`dirname $0` | |
| 12 | |
| 13 | |
| 14 | |
| 15 perl $directory/getSequenceInfo.pl -directory $dir -k $availableKingdoms -l $assemblylevel -s $species -n $quantity -o $output | |
| 16 | |
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