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comparison resfinder/db_pointfinder/plasmodium_falciparum/resistens-overview.txt @ 0:a16d245332d6 draft default tip

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author dcouvin
date Wed, 08 Dec 2021 01:46:07 +0000
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1 #Gene_ID Gene_name no_of_mut Codon_pos Ref_nuc Ref_codon Mut_codon Resistance PMID
2 DHPS DHPS 431 ATA I V Sulphadoxine -
3 DHPS DHPS 436 TCT S A,F Sulphadoxine -
4 DHPS DHPS 437 GGT G A Sulphadoxine -
5 DHPS DHPS 540 AAA K E Sulphadoxine -
6 DHPS DHPS 581 GCG A G Sulphadoxine -
7 DHPS DHPS 613 GCC A S,T Sulphadoxine -
8 DHFR DHFR 16 GCT A V Pyrimethamine -
9 DHFR DHFR 51 AAT N I Pyrimethamine -
10 DHFR DHFR 59 TGT C R Pyrimethamine -
11 DHFR DHFR 108 AGC S N Pyrimethamine -
12 DHFR DHFR 164 ATA I L Pyrimethamine -
13 CRT CRT 72 TGT C S Chloroquine -
14 CRT CRT 74 ATG M I Chloroquine -
15 CRT CRT 75 AAT N E Chloroquine -
16 CRT CRT 76 AAA K T Chloroquine -
17 MDR MDR 86 AAT N Y Chloroquine, Amodiaquine -
18 MDR MDR 86 TAT Y N Lumefantrine, Mefloquine -
19 MDR MDR 184 TAT Y F Lumefantrine, Mefloquine -
20 MDR MDR 184 TTT F Y Chloroquine, Amodiaquine -
21 MDR MDR 1034 AGT S C Chloroquine, Mefloquine -
22 MDR MDR 1042 AAT N D Chloroquine, Mefloquine -
23 MDR MDR 1246 GAT D Y Chloroquine, Amodiaquine -
24 MDR MDR 1246 TAT Y D Lumefantrine, Mefloquine -
25 K13 K13 580 TGT C Y Artemisinin -
26 PIP PIP 415 GAA E G Piparaquine -