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diff resfinder/db_resfinder/nitroimidazole.fsa @ 0:a16d245332d6 draft default tip

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author dcouvin
date Wed, 08 Dec 2021 01:46:07 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/resfinder/db_resfinder/nitroimidazole.fsa	Wed Dec 08 01:46:07 2021 +0000
@@ -0,0 +1,131 @@
+>nimA_1_X71444 
+ATGTTCAGAGAAATGCGGCGCAAACGCCAGTTGTTGCCGCCCGAAGAAAGCTTGGCGATA
+CTGGAGCGCATGACCGGCGGTACGCTTGCCCTTCATGGCGACAACGGATATCCGTATGCC
+GTCCCCGTGAGCTATGTGTATGCCGACGGGAAGATTTATTTTCACGGTGCCGTGCAAGGG
+CATAAGATGGATGCCATCAGGCAGCATCCCGAAGTCTCGTTTTGTGTGGTGGAGCAAGAC
+CGGATAGTTCCTGCCGAGTTTACAACCTATTTCCGGAGTGTCATTGTCTTCGGTAAAGCC
+CGTATCCTGACCGATGAGGTCGAGAAGCGTGCCGCTCTGCTTCGGCTGGCAGAGAAGTAT
+TCGTCCGGCGAGTCGGGTATGCAAGACGAGATAGACAAGGGATTCGACCATCTGGTAATG
+GTGGAGATAACCGTCGAGCACATGACAGGCAAGGAGGCTATACAGCTGGTGCGCAGAAAG
+GGAAATAACAGGTGGGACGCTTTTCCGTCAAAGGACGTTTTTATCAGATAG
+>nimB_1_X71443 
+ATGTTTAGAGAAATGCGACGTAAGCGGCAATTATTGCCAACAGAAGAAAGCGTTGCCATC
+CTTGAAAGGATGACGAACGGAACATTGGCTCTTCATGGGGACGATGGTTACCCGTATGCC
+GTTCCCATCAGTTATGTATATGCTGATGGCAAAATATATTTCCATAGTGCCATGAAAGGT
+CATAAAGTGGATGCCATTTTGCAGAATGACAAGGTATCATTCTGCGTGGTAGAACAGGAT
+GACATCAGACCGTCTGAGTTTACCACTTACTTTCGAAGTGTGATAGTCTTTGGCAAAGCC
+CACATATTGACGGATGAACTCGAAAAACGTGTTGCTTTGGGTTTATTGGCAGACAAGTAT
+TCGTATGGCGAAGCTGGCATGGAGGCTGAAATAGCCAAAGGGTTCAATCATTTGTTAATA
+GTGAAAATTGCAATTGAGCATATTACAGGCAAGGAAGCCATAGAACTGACCAAAAATAGG
+AATGACCGTCCTTGA
+>nimC_1_X76948 
+ATGTTCAGAGCGATGCGTCCGAAGCGGCACGAGTTGCCCACCGATGAGAGCGTAGGCATA
+TTGAAGCGAATGACCAACGGCACGCTGGCCCTGCATGGCGATGGCGATTATCCGTATGCC
+GTGCCCGTCAGCTATGTGTACAGCGACGGGCGAATCTATTTCCACACGGCCACGCAAGGG
+CATAAGGTAGATGCCCTGATGCGGAACGACAAGGTATCGTTCTGCGTGGTGGAGCAAGAT
+GACGTGAAATCTGCCGAGTTCACCACTTACTTCCGGAGCGTAATACCGTTCGGCAGGGCA
+CGCATCCTGACGGACGAGACGGAGAACGGTGCCGCATTGCAGCTGCTTGCCGACAAATAT
+TCGTCCGGTATGCCCGGTCTGGAGGCCGTGATAGCCAAAGGCTTCCGTCACCTGCTGATG
+GTGGAGATAGATATTGAGCACCTGACGGGCAAGGAATCTATCGAGCTGGTCAGGGAAAAG
+AATGACATGTAA
+>nimD_1_X76949 
+ATGTTTAGAGAAATGCCGCGTAAGCGGCAATTGTTGCCAACAGAAGAAAGCGTTGCCATT
+CTTGAACGGATGACAAACGGGACGTTGGCTCTTCATGGGGATGACGGCTATCCGTATGCC
+GTCCCTGTCAGTTATGTATATGCCGATGGCAAAATTTACTTCCACAGTGCCATGCAAGGG
+CCAAAAGTGGATGCCATCCTGCGGAATGACAAGGTCTCGTTCTGCGTAGTGGAGCAGGAT
+GAGGTCAAGCCGGCCGAGTTTACCACCTATTTTCGGAGCGTGATAGTCTTTGGCAAGGCC
+CGCATACTGACCGACGAGAACGAAAAACGAAATGCCTTAAACCTGCTGGCCGACAAGTAT
+TCGCATGGCGAAGCGGGCATGGAGGCTGAAATGGCCAAAGGGTTCAATCATTTGCTGATG
+ATAGAAATCACAGTAGAGCAGATGACCGGAAAAGAAGCCATCGAACTGACAAGGGGAAGA
+AACGGATGTTCTTGA
+>nimE_1_AJ244018 
+ATGTTCAGAGAAATGCGGCGTAAGCGACAGTTGTTGCCACAAGAAGAGAGCGTGGCAATT
+CTTGAAAAAATGACAAACGGGACTTTAGCTCTCCACGGAGATAATGGCTATCCTTATGCC
+GTTCCTCTCAGTTATGTTTATGCTGATGGCAAAATCTATTTTCATTGCGCCAAGATAGGG
+CATAAGGTGGACGCTATTATGCAAAACAATAAAGTATCGTTTTGCGTTGTGGAACAAGAC
+AATATTAAACCTGCCGAATTCACGACCTACTTTCGAAGTGTGATAGTCTTTGGAAAGGCC
+TATATTTTAACCGACGAAACAGAAAAACGTATGGCTTTGACTTTGCTGATGAATAAATAT
+TCTTTCGGTGAGCCAGGTTTGTCTGATGAAATAGCCAAAAGCTTCAACCATCTACTGATG
+GTAAAGATCGATATCGAGCACATGACAGGCAAGGAAGC
+>nimE_1_AM042593 
+ATGTTCAGAGAAATGCGTCGTAAACGACAGTTGTTGCCACAAGAAGAGAGCGTGGCAATT
+CTTGAAAAAATGACAAACGGGACTTTAGCTCTCCACGGAGATAATGGCTATCCTTATGCC
+GTTCCTCTCAGTTATTTTTATGCTGATGGCAAAATCTATTTTCATTGCGCCAAGATAGGG
+CATAAGGTGGACGCTATTATGCAAAACAATAAAGTATCGTTTTGCGTTGTGGAACAAGAC
+AATATTAAACCTGCCGAATTCACGACCTACTTTCGAAGTGTGATAGTCTTTGGAAAGGCC
+TATATTTTAACCGACGAAACAGAAAAACGTATGGCTATGACTTTGCTGGTGAATAAATAT
+TCTTTCGGTGAGCCAGGTTTGTCTGATGAAATAGCCAAAAGCATCAACCATCTACTGATG
+GTAAAGATCGATATC
+>nimF_1_AJ515145 
+ATGTTCAGAGAAATGCGGCGTAAGCGGCAGCAACTGTCTGCCGAAGAAAGTATTGCCATC
+CTTGAACGGATGACGAACGGAGTGCTGGCACTTCATGGGGATGAAGGTTATCCGTATGCC
+GTCCCTGTCAGTTATGTATATGCGGATGGGAAGATTTATTTCCACAGTGCCATGAAAGGC
+CATAAGGTGGATGCCATCATGCGGAATGAACGTGTTTCGTTCTGCGTAGTGGAACGGGAC
+GATGTCTGTCCGGGCGAGTTCACCACCTACTTCAGGAGCGTGGTGCTCTTCGGCAAGACC
+CGTATTTTGACGGAAGAGGCCGAAAAGTTGGCGGCCTTGAGCTTGCTTGCCGACAAATAT
+TCACCGGGAGAACCCGGTAAAGATGCCGAAATCGCCAAAGGGTTTAACCTGCTGATGGTG
+GAAATTGCAGTCGAGCACATGACAGGCAAGGAAGC
+>nimH_1_KX576455 
+ATGTTCAGAGAAATGCGGCGTAAGCGGCAATTGTTGCCAACTGAGGAAAGCATCACTATC
+CTCGAAAAGATGACGAACGGAACGTTGGCTCTCCATGGGGACAACGGCTATCCGTATGCC
+GTCCCCGTCAGTTATGTATATGCAGATGGCAAGATATACTTCCACAGTGCCGTGAAAGGG
+CATAAAGTGGATGCCATCTTGCGAAACAATAAGGTCTCGTTCTGCGTGGTGGAGCAAGAT
+GATGTCAAGCCTGCTGAATTTACCACTTACTTCCGAAGCGTGATAGCTTTCGGCAAAGCA
+CGTATTCTGGCGGATGAGGGAGAAAAACAGCTTGCCTTTCGGCTATTGGCAGACAAGTAT
+TCGCATGGTGAGGTCGGCATGGAAGCTGAAATAGCCAAAGGTTTCAATCATTTGCTGATG
+GTGGAAATCATGGTTGAGCACATGACAGGCAAGGAAGC
+>nimI_1_FJ940883 
+ATGTTCAGAGAAATGCGGCGTAAGCGCCAGCAACTTTCAGACGCAGAGAGCGTCGGAATC
+CTGGAGAACGCCACGTCGGGAACCCTTGCCCTGCAAGGGGATGGCGGCTATCCCTACGCC
+GTACCCATCAGTTATGTCCACGCCGACGGCAAACTGTACTTCCACAGCGCTCTGAAAGGC
+CACAAAGTCGACGCCATCAGAGGCTGCGACAAGGCTTCGTTTTGCGTCATCGAGCAAGAC
+GAGGTGCATGGCGAGGAGTACACGACCTACTTCCGCAGCGTCATCGCCTTTGGACGAATC
+CGCATTCTTGAAGACGAAACGGAGCGGATGGCGGCCGCCCGGCTGCTCGGCGACCGCTAT
+CATCCCCATCACGAGGAAGCGCTCGGCAGGGAATTGGCCAAGAGTTTCAGCCACATGCTG
+GTCATCTGTCTCGACATCGAGCACATGACAGGCAAGG
+>nimI_1_FJ940884 
+ATGTTCAGAGAAATGCGGCGTAAGCGCCAGCAACTTTCAGACGCGGAGTGCGTCGGAATC
+CTGGAGAACGCCACGTCGGGAACCCTTGCCCTGCAAGGGGATGGCGGCTATCCCTACGCC
+GTACCCATCAGTTATGTCCACGCCGACGGCAAACTGTACTTCCACAGCGCTCTGAAAGGC
+CACAAAGTCGACGCCATCAGGGGCTGTGACAAGGCTTCGTTTTGCGTCATCGAGCAAGAC
+GAGGTGCATGGCGAGGAGTACACGACCTACTTCCGCAGCGTCATCGCCTTTGGACGAATC
+CGCATTCTTGAAGACGAAGCGGAGCGGATGGCGGCCGCCCGGCTGCTCGGCGACCGCTAT
+CATCCCCATCACGAGGAAGCGCTCGGCAGGGAACTGGCCAAGAGTTTCGGCCACATGTTG
+GTCATCTGCCTTGACATCGAGCACATGACAGGCAAGG
+>nimI_1_FJ940886 
+ATGTTCAGAGAAATGCGGCGTAAGCGCCAGCAACTTTCAGACGCGGAGTGCGTCGGAATC
+CTGGAGAACGCCACGTCGGGAACCCTTGCCCTGCAAGGGGATGGCGGCTATCCCTACGCC
+GTGCCCATCAGCTATGTACATGCCGACGGCAAACTGTACTTCCACAGTGCTCTGAAAGGC
+CACAAAGTCGACGCCATCAGAGGCTGCGACAAGGCTTCGTTTTGCGTCATCGAGCAAGAC
+GAGGTGCATGGCGAGGAGTACACGCCCTACTTCCGCAGCGTCGTCGCCTTTGGACGAATC
+CGCATTCTTGAAGACGAAGCGGAGCGGATGGCGGCCGCCCGGCTGCTCGGCGACCGCTAT
+CATCCCCATCACGAGGAAGCGCTCGGCAGGGAACTGGCCAAGAGTTTCAGCCACATGCTG
+GTCATCTGTCTCGACATCGAGCACATGACAGGCAAGG
+>nimI_1_FJ940887 
+ATGTTCAGAGAAATGCGGCGTAAGCGCCAGCAACTTTCAGACGCGGAGTGCGTCGGAATC
+CTGGAGAACGCCACGTCGGGAACCCTTGCCCTGCAAGGGGATGGCGGCTATCCCTACGCC
+GTACCCATCAGTTATGTCCACGCCGACGGCAAACTGTACTTCCACAGCGCTCTGAAAGGC
+CACAAAGTCGACGCCATCAGAGGCTGCGACAAGGCTTCGTTTTGCGTCATCGAGCAAGAC
+GAGGTGCATGGCGAGGAGTACACGACCTACTTCCGCAGCGTCGTCGCCTTTGGACGAATC
+CGCATTCTTGAAGACGAAGCGGAGCGGATGGCGGCCGCCCGGCTGCTCGGCGACCGCTAT
+CATCCCCATCACGAGGAAGCGCTCGGCAGGGAACTGGCCAAGAGTTTCAGCCACATGCTG
+GTCATCTGTCTCGACATCGAGCACATGACAGGCAAGG
+>nimI_1_FJ940889 
+ATGTTCAGAGAAATGCGGCGTAAGCGCCAGCAACTTTCAGACGCGGAGTGCGTCGGAATC
+CTGGAGAACGCCACGTCGGGAACCCTTGCCCTGCAAGGGGATGGCGGCTATCCCTACGCC
+GTACCCATCAGTTATGTCCACGCCGACGGCAAACTGTACTTCCACAGCGCTCTGAAAGGC
+CACAAAGTCGACGCCATCAGAGGCTGCGACAAGGCTTCGTTTTGCGTCATCGAGCAAGAC
+GAGGTGCATGGCGAGGAGTACACGACCTACTTCCGCAGCGTCATCGCCTTTGGACGAATC
+CGCATTCTTGAAGACGAAACGGAGCGGATGGCGGCCGCCCGGCTGCTCGGCGACCGCTAT
+CATCCCCATCACGAGGAAGCGCTCGGCAGGGAACTGGCCAAGAGTTTCAGCCACATGCTG
+GTCATCTGTCTCGACATCGAGCACATGACAGGCAAGGAAGCAC
+>nimJ_1_NZ_JH815495 
+ATGAATGAATTTAGAGAAATGAGGCGCAAACGCCAACAGCTTTCAGAAGAAGAAAGCATT
+GCCATATTGCAAAAAGCTACGGCCGGCACTTTAGCATTACTTGGCGACAATGACTATCCC
+TATGCCGTCCCCATCAGCTATGTCTATGCCGATGGCAGATTATATTTCCATAGTGCACTG
+AGCGGTCATAAAGTCGATGCCATACGAAAGTGTGACAAGGCTTCGTTCTGTGTCATCGAA
+CAGGATGAAGTGCATCCAGAGAAATACACCACTTTCTTTCGGAGTGTCATCGCATTTGGA
+AGAATCCATATCATTGAGGATGAAACTGAGAAACTGGAAACAGCCCGGATGCTTGTGAAC
+AGATATAATCCCAACCAAGAGGAAGCCTTGCAGAAAGAGTTGGAGAATGGCCTGTCGCGG
+ATGCTGATGATTCGTTTCGACATAGAGCATCTTACGGGAAAAGAAGCGATAGAATTAGTG
+AGAAGGCATCAAAAGTAA