Mercurial > repos > dereeper > admixture

diff Admixture.pl @ 6:3f66f32dc5d9 draft

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planemo upload
author dereeper
date Wed, 13 Apr 2016 07:53:25 -0400
parents 97c9c8daa3c3
children c3ebf600f975
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line diff
--- a/Admixture.pl	Wed Apr 13 07:51:13 2016 -0400
+++ b/Admixture.pl	Wed Apr 13 07:53:25 2016 -0400
@@ -67,7 +67,7 @@
 my %errors;
 for (my $k = $kmin; $k <= $kmax; $k++)
 {
-	system("/apps/www/sniplay.cirad.fr/tools/admixture/admixture_linux-1.23/admixture --cv $input.bed $k >>$directory/log.$k 2>&1");
+	system("admixture --cv $input.bed $k >>$directory/log.$k 2>&1");
 	my $cv_error_line = `grep -h CV $directory/log.$k`;
 	if ($cv_error_line =~/: (\d+\.*\d*)$/)
 	{