Mercurial > repos > dereeper > haplotype_analysis_workflow
view Galaxy-Workflow-Haplotype_analysis.ga @ 0:f81b8b6a97fb draft
planemo upload commit 11382afe87364aaafb19973470d5066229a6e34f-dirty
author | dereeper |
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date | Tue, 14 Aug 2018 08:32:12 -0400 |
parents | |
children | bd20187f16c5 |
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{ "a_galaxy_workflow": "true", "annotation": "", "format-version": "0.1", "name": "Haplotype_analysis", "steps": { "0": { "annotation": "", "content_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/vcftools_filter_stats_diversity/sniplay_vcftoolsfilter/2.0.0", "errors": null, "id": 0, "input_connections": {}, "inputs": [ { "description": "runtime parameter for tool VCFtools Filter", "name": "input" } ], "label": null, "name": "VCFtools Filter", "outputs": [ { "name": "fileout", "type": "vcf" }, { "name": "fileout_map", "type": "tabular" }, { "name": "filelog", "type": "txt" } ], "position": { "left": 121.5, "top": 247 }, "post_job_actions": {}, "tool_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/vcftools_filter_stats_diversity/sniplay_vcftoolsfilter/2.0.0", "tool_shed_repository": { "changeset_revision": null, "name": "vcftools_filter_stats_diversity", "owner": "vmarcon", "tool_shed": "testtoolshed.g2.bx.psu.edu" }, "tool_state": "{\"nb_alleles_min\": \"\\\"2\\\"\", \"chromosomes\": 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tool Haplophyle", "name": "input" } ], "label": null, "name": "Haplophyle", "outputs": [ { "name": "fileout", "type": "json" }, { "name": "dotfile", "type": "txt" }, { "name": "filelog", "type": "txt" } ], "position": { "left": 856.5, "top": 377 }, "post_job_actions": {}, "tool_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/haplophyle/haplophyle/1.0.0", "tool_shed_repository": { "changeset_revision": null, "name": "haplophyle", "owner": "vmarcon", "tool_shed": "testtoolshed.g2.bx.psu.edu" }, "tool_state": "{\"color\": \"{\\\"__current_case__\\\": 0, \\\"choice\\\": \\\"false\\\"}\", \"input\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"__page__\": null}", "tool_version": "1.0.0", "type": "tool", "uuid": "31d5583a-740b-46e2-80d8-02d0315ac954", "workflow_outputs": [] }, "4": { "annotation": "", "content_id": "testtoolshed.g2.bx.psu.edu/repos/vmarcon/cytoscape/Cytoscape/1.0.0", "errors": null, "id": 4, "input_connections": { "input": { "id": 3, 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