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1 -=- PGAP 1.2.1 README -=-
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2 PGAP is a Pan-Genomes Analysis Pipeline.
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3
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4 For the installation and usage of PGAP, please refer to manual.pdf.
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5
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6 There is also a brief tutorial in manual.pdf.
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7
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8 -=- Change Log 1.2.1 -=-
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9 1.Fix the bug in Converter_NCBINewFormatData.pl.
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10
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11 -=- Change Log 1.2.0 -=-
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12 1.A new script (Converter_NCBINewFormatData.pl) was developed for converting new format bacterial genomic data from NCBI at ftp://ftp.ncbi.nlm.nih.gov/genomes/all
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13
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14 -=- Change Log 1.12 -=-
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15 1.Fix the bug in the Perl converter Converter_draft.pl.
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16
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17 -=- Change Log 1.11 -=-
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18 1.Fix the bug in the two Perl converters (Converter_finished.pl and Converter_draft.pl).
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19
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20 -=- Change Log 1.1 -=-
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21 1.Add sampling strategy into the pan-genome analysis module. This strategy will efficiently reduce time cost and memory cost.
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22 2.Revise the input data for SNP-based phylogenetic analysis
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