Mercurial > repos > dereeper > roary_plots

annotate Roary/t/data/expected_group_statitics_missing_genes.csv @ 1:997f4f276c1c draft

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author dereeper
date Fri, 14 May 2021 20:42:33 +0000
parents c47a5f61bc9f
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c47a5f61bc9f Uploaded
dereeper
parents:
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1 "Gene","Non-unique Gene name","Annotation","No. isolates","No. sequences","Avg sequences per isolate","Genome Fragment","Order within Fragment","Accessory Fragment","Accessory Order with Fragment","QC","Min group size nuc","Max group size nuc","Avg group size nuc","query_1.fa","query_2.fa","query_3.fa","query_4_missing_genes.fa"
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
2 "hly","","Alpha-toxin","4","4","1","","","","","","959","959","959","1_1","2_1","3_1","4_1"
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
3 "speH","","hypothetical protein","2","2","1","","","","","","725","725","725","1_2","2_2","",""
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
4 "argF","","Ornithine carbamoyltransferase","2","2","1","","","","","","1001","1001","1001","1_3","","3_3",""
c47a5f61bc9f Uploaded
dereeper
parents:
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5 "group_4","","","2","2","1","","","","","","","","","","2_4","3_4",""
c47a5f61bc9f Uploaded
dereeper
parents:
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6 "yfnB","","Putative HAD-hydrolase yfnB","1","1","1","","","","","","686","686","686","","","3_5",""
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
7 "group_6","","Gonococcal growth inhibitor III","1","1","1","","","","","","134","134","134","1_6","","",""
c47a5f61bc9f Uploaded
dereeper
parents:
diff changeset
8 "group_7","","Gonococcal growth inhibitor III","1","1","1","","","","","","134","134","134","","2_7","",""