Mercurial > repos > dereeper > roary_plots

annotate roary_plots.sh @ 0:c47a5f61bc9f draft

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author dereeper
date Fri, 14 May 2021 20:27:06 +0000
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1 #!/bin/bash
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2
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3 tool_path=$(dirname $0)
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4 input=$2
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5 tree=$1
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6 heatmap=$3
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7
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8 python3 $tool_path/Roary/contrib/roary_plots/roary_plots.py --labels $tree $input
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9
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10 cp -rf pangenome_matrix.png $heatmap