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annotate Roary/t/data/shred1.gff @ 3:e95344f6dfc5 draft default tip

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author dereeper
date Fri, 12 Nov 2021 16:32:26 +0000
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1 ##gff-version 3
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2 ##sequence-region shredA 1 40
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3 ##sequence-region shredB 1 40
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4 shredA Prodigal:2.60 CDS 179 1471 . - 0 ID=11983_1#21_00001;eC_number=2.7.13.3;gene=regB;inference=ab initio prediction:Prodigal:2.60,similar to AA sequence:RefSeq:YP_005150533.1,similar to AA sequence:UniProtKB:Q3J6C1,protein motif:CLUSTERS:PRK11360,protein motif:Cdd:COG4191,protein motif:TIGRFAMs:TIGR02966,protein motif:Pfam:PF02518.20;locus_tag=11983_1#21_00001;product=integral membrane sensor signal transduction histidine kinase,Sensor histidine kinase regB,sensory histidine kinase AtoS,Signal transduction histidine kinase regulating C4-dicarboxylate transport system,phosphate regulon sensor kinase PhoR,Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase;protein_id=gnl|SC|11983_1#21_00001
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5 ##FASTA
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6 >shredA
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7 AAAAAAAAAACCCCCCCCCCGGGGGGGGGGTTTTTTTTTT
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8 >shredB
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9 AAAAAAAAAACCCCCCCCCCGGGGGGGGGGTTTTTTTTTT