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diff Roary/t/data/mdoH.fa.aln @ 0:c47a5f61bc9f draft

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author dereeper
date Fri, 14 May 2021 20:27:06 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/Roary/t/data/mdoH.fa.aln	Fri May 14 20:27:06 2021 +0000
@@ -0,0 +1,88 @@
+>11111_1#11_04119
+ATGAATAAAACAACTGAGTATATTGACGCACTGCTGCTTTCTGAACGTGAGAAAGCGGCA
+TTGCCGAAAACTGACATCCGCGCCGTGCATCAGGCGCTGGATGCCGAGCATCGGACTTAC
+TCGCGAGAAGACGATTCACCGCAGGGTTCCGTAAAAGCCCGCCTTGAACACGCCTGGCCG
+GATTCATTGGCGAAGGGGCAGTTAATTAAAGATGATGAAGGGCGCGATCAGTTGCAGGCT
+ATGCCAAAAGCGACGCGCTCTTCGATGTTTCCTGATCCCTGGCGAACCAACCCGGTTGGC
+CGTTTCTGGGATCGCCTGCGTGGGCGGGATGTAACGCCGCGCTATGTTTCTCGTCTGACA
+AAAGAAGAGCAGGCGAGTGAGCAAAAATGGCGTACCGTCGGCACTATACGCCGCTATATT
+TTGTTAATTTTGACTCTGGCGCAAACCGTCGTCGCGACCTGGTATATGAAGACCATTCTG
+CCCTATCAGGGATGGGCGCTCATCAATCCTATGGATATGGTGGGGCAGGATATTTGGGTC
+TCCTTTATGCAGCTCCTGCCCTACATGCTGCAAACCGGTATCCTGATTTTGTTTGCCGTG
+CTGTTCTGCTGGGTGTCTGCCGGATTCTGGACGGCGCTGATGGGCTTCCTGCAACTGCTT
+ATCGGGCGCGATAAGTACAGTATCTCCGCGTCTACGGTTGGCGATGAGCCCCTCAATCCG
+GAACACCAGACGGCGCTGATCATGCCTATCTGTAATGAAGACGTTAGCCGCGTTTTCGCC
+GGTCTGCGCGCGACCTGGGAGTCCGTTAAAGCCACAGGCAACGCCGCGCATTTTGACGTC
+TATATCCTTAGCGATAGTTATAACCCGGATATCTGCGTGGCGGAGCAAAAGGCGTGGATG
+GAGCTCATCGCGGAAGTGCAGGGCGAAGGCCAAATTTTTTACCGTCGCCGCCGCCGCCGT
+ATGAAACGCAAAAGCGGCAATATTGACGATTTTTGCCGCCGCTGGGGCAATCAGTACAGC
+TATATGGTGGTGCTGGACGCGGACTCAGTGATGAGCGGCGAGTGTCTGAGCGGGCTGGTG
+CGCCTGATGGAAGCGAACCCTAACGCCGGGATTATCCAGTCTTCGCCGAAAGCGTCGGGG
+ATGGATACTCTGTATGCCCGCTGCCAACAGTTCGCGACCCGTGTTTATGGACCGCTGTTT
+ACCGCCGGGCTGCACTTCTGGCAGTTGGGGGAGTCGCACTACTGGGGGCACAATGCCATT
+ATCCGCGTGAAGCCGTTTATCGAGCACTGCGCTCTGGCGCCGCTGCCGGGAGAAGGTTCG
+TTCGCCGGATCGATTCTTTCCCACGACTTTGTGGAGGCGGCGCTAATGCGTCGGGCAGGG
+TGGGGCGTCTGGATTGCCTACGATCTCCCCGGCTCCTATGAAGAGCTGCCGCCAAACCTG
+CTGGATGAGCTTAAACGCGACCGCCGCTGGTGTCACGGCAACCTGATGAACTTTCGTCTG
+TTCCTGGTGAAAGGAATGCACCCGGTGCATCGCGCCGTGTTCCTGACCGGGGTAATGTCA
+TACCTGTCCGCGCCGTTATGGTTTATGTTCCTCGCGCTTTCTACCGCGCTGCAGGTCGTT
+CATGCGTTAACAGAGCCGCAATATTTCCTTCAGCCGCGCCAGCTTTTTCCGGTCTGGCCG
+CAGTGGCGTCCGGAACTGGCAATCGCGCTGTTTGCGTCAACGATGGTGCTGCTGTTCCTG
+CCGAAGCTGCTCAGTATTATGCTGATCTGGTGTAAAGGCACCAAAGAGTATGGCGGTTTC
+TGGCGCGTTACGCTGTCGCTATTGCTGGAAGTGCTGTTCTCCGTGTTGCTGGCGCCGGTG
+CGTATGCTGTTTCATACCGTGTTTGTGGTCAGCGCGTTCCTCGGCTGGGAAGTGGTCTGG
+AACTCACCGCAACGCGACGATGATTCTACGCCGTGGGGAGAAGCCTTTATGCGTCACGGC
+TCTCAACTGCTGCTGGGGCTGGTCTGGGCGGTGGGTATGGCGTGGCTGGATTTACGCTTT
+CTGTTCTGGCTGGCGCCGATTGTCTTTTCGCTGATTCTGTCGCCATTTGTTTCGGTGATC
+TCCAGTCGTTCAACGGTAGGATTACGCACCAAACGCTGGAAGCTGTTCCTGATCCCGGAA
+GAGTATTCGCCGCCTCAGGTGTTGGTCGATACCGATAAATATCTGGAGATGAATCGCCGC
+CGTATTCTGGACGATGGCTTTATGCATGCGGTATTTAACCCGTCGCTTAATGCGCTGGCG
+ACCGCGATGGCCACCGCGCGTCACCGCGCCAGTAAGGTGCTGGAAATAGCCCGCGATCGT
+CATGTGGAGCAGGCGCTAAACGAAACGCCGGAGAAACTGAACCGCGATCGGCGTCTGGTT
+TTGCTCAGCGATCCGGTGACGATGGCGCGTTTACACTATCGGGTCTGGAATGCGCCAGAG
+AGATACTCTTCCTGGGTAAACCATTATCAGTCTCTCGTCCTGAATCCGCAGGCGTTGCAG
+GGACGAACATCGTCAGCGGGATAA
+>22222_2#22_04119
+ATGAATAAAACAACTGAGTATATTGACGCACTGCTGCTTTCTGAACGTGAGAAAGCGGCA
+TTGCCGAAAACTGACATCCGCGCCGTGCATCAGGCGCTGGATGCCGAGCATCGGACTTAC
+TCGCGAGAAGACGATTCACCGCAGGGTTCCGTAAAAGCCCGCCTTGAACACGCCTGGCCG
+GATTCATTGGCGAAGGGGCAGTTAATTAAAGATGATGAAGGGCGCGATCAGTTGCAGGCT
+ATGCCAAAAGCGACGCGCTCTTCGATGTTTCCTGATCCCTGGCGAACCAACCCGGTTGGC
+CGTTTCTGGGATCGCCTGCGTGGGCGGGATGTTACGCCGCGCTATGTTTCTCGTCTGACA
+AAAGAAGAGCAGGCGAGTGAGCAAAAATGGCGTACCGTCGGCACTATACGCCGCTATATT
+TTGTTAATTTTGACTCTGGCGCAAACCGTCGTTGCGACCTGGTATATGAAGACCATTCTG
+CCCTATCAGGGATGGGCGCTCATCAATCCTATTGATATGGTGGGGCAGGATATTTGGGTC
+TCCTTTATGCAGCTCCTGCCCTACATGCTGCATACCGGTATCCTGATTTTGTTTGCCGTG
+CTGTTCTGCTGGGTGTCTGCCGGATTCTGGACTGCGCTGATGGGCTTCCTGCAACTGCTT
+ATCGGGCGCGATAAGTACAGTATCTCCGCGTCTACGGTTGGCGATGAGCCCCTCAATCCG
+GAACACCAGACGGCGCTGATCATGCCTATCTGTAATGAAGACGTTAGCCGCGTTTTCGCC
+GGTCTGCGCGCGACCTGGGAGTCCGTTAAAGCTACAGGCAACGCCGCGCATTTTGACGTC
+TATATCCTTAGCGATAGTTATAACCCGGATATTTGCGTGGCGGAGCAAAAGGCGTGGATG
+GAGCTCATCGCGGAAGTGCAGGGCGAAGGCCATATTTTTTACCGTCGCCGCCGCCGCCGT
+ATGAAACGCAAAAGCGGCAATATTGACGATTTTTGCCGCCGCTGGGGCAATCAGTACAGC
+TATATGGTGGTGCTGGACGCGGACTCAGTGATTAGCGGCGAGTGTCTGAGCGGGCTGGTG
+CGCCTGATGGAAGCGAACCCTAACGCCGGGATTATCCAGTCTTCGCCGAAAGCGTCGGGG
+ATGGATACTCTGTATGCCCGCTGCCAACAGTTTGCGACCCGTGTTTATGGACCGCTGTTT
+ACCGCCGGGCTGCACTTCTGGCAGTTGGGGGATTCGCACTACTGGGGGCACAATGCCATT
+ATCCGCGTGAAGCCGTTTATCGAGCACTGCGCTCTGGCGCCGCTGCCGGGAGAAGGTTCG
+TTCGCCGGATCGATTCTTTCCCACGACTTTGTTGAGGCGGCGCTAATGCGTCGGGCAGGG
+TGGGGCGTCTGGATTGCCTACGATCTCCCCGGTTCCTATGAAGAGCTGCCGCCAAACCTG
+CTGGATGAGCTTAAACGCGACCGCCGCTGGTGTCACGGCAACCTGATGAACTTTCGTCTG
+TTCCTGGTGAAAGGAATGCACCCGGTGCATCGTGCCGTGTTCCTGACCGGGGTAATGTCA
+TACCTGTCCGCGCCGTTATGGTTTATGTTCCTTGCGCTTTCTACCGCGCTGCAGGTCGTT
+CATGCGTTAACAGAGCCGCAATATTTCCTTCATCCGCGCCAGCTTTTTCCGGTCTGGCCG
+CAGTGGCGTCCGGAACTGGCAATCGCGCTGTTTGCGTCAACGATGGTGCTGCTGTTCCTG
+CCGAAGCTGCTCAGTATTATGCTGATCTGGTGTAAAGGCACCAAAGAGTATGGCGGTTTC
+TGGCGCGTTACGCTGTCGCTATTGCTGGAAGTTCTGTTCTCCGTGTTGCTGGCGCCGGTG
+CGTATGCTGTTTCATACCGTGTTTGTGGTCAGTGCGTTCCTCGGCTGGGAAGTGGTCTGG
+AACTCACCGCAACGCGACGATGATTCTACGCCTTGGGGAGAAGCCTTTATGCGTCACGGC
+TCTCAACTGCTGCTGGGGCTGGTCTGGGCGGTTGGTATGGCGTGGCTGGATTTACGCTTT
+CTGTTCTGGCTGGCGCCGATTGTCTTTTCGCTTATTCTGTCGCCATTTGTTTCGGTGATC
+TCCAGTCGTTCAACGGTAGGATTACGCACCAATCGCTGGAAGCTGTTCCTGATCCCGGAA
+GAGTATTCGCCGCCTCAGGTGTTGGTCGATACTGATAAATATCTGGAGATGAATCGCCGC
+CGTATTCTGGACGATGGCTTTATGCATGCGGTTTTTAACCCGTCGCTTAATGCGCTGGCG
+ACCGCGATGGCCACCGCGCGTCACCGCGCCAGTAAGGTGCTGGAAATAGCCCGCGATCGT
+CATGTGGAGCAGGCGCTAAACGAAACGCCGGATAAACTGAACCGCGATCGGCGTCTGGTT
+TTGCTCAGCGATCCGGTGACGATGGCGCGTTTTCACTATCGGGTCTGGAATGCGCCAGAG
+AGATACTCTTCCTGGGTAAACCATTATCAGTCTCTCGTCCTGAATCCGCAGGCGTTGCAG
+GGACGAACATCGTCAGCGGGATAA