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diff Roary/t/data/nuc_multifasta.fa @ 0:c47a5f61bc9f draft

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author dereeper
date Fri, 14 May 2021 20:27:06 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/Roary/t/data/nuc_multifasta.fa	Fri May 14 20:27:06 2021 +0000
@@ -0,0 +1,112 @@
+>AAAA#74_01075
+TGTCAGTACCACTTATTCTGACCTTACTGGCGGGCGCTGCCACCTTTATTGGCGCGTTTC
+TTGGCGTTCTTGGCCAAAAACCGTCTAACCGCGTGCTGGCTTTTTCGCTGGGCTTCGCCG
+CAGGGATCATGCTGCTCATCTCGCTGATGGAGATGCTGCCCGCCGCGTTAGATACCGAGG
+GGATGTCGCCTGTACTGGGCTACGGGATGTTTATTATCGGCCTGTTGGGCTACTTCGGGC
+TGGATCGTCTGCTTCCTCACGCTCATCCGCAGGATCTGGTGCAAAAAAGGCAGCAGCCGC
+TTCCCGGCTCGATAAAACGCACTGCGATTTTATTGACGCTCGGCATTAGCCTGCACAACT
+TTCCGGAAGGAATCGCCACCTTTGTCACTGCCAGCAGCAATCTTGAACTGGGTTTCGGCA
+TCGCACTGGCGGTGGCGTTGCACAATATTCCTGAAGGGCTGGCGGTTGCCGGCCCGGTTT
+ATGCCGCGACGGGCTCAAAACGTACCGCGATTTTTTGGGCCGGTATCTCCGGCATGGCGG
+AAATTCTTGGCGGCGTGCTGGCGTGGCTGATTTTGGGCAGCCTGGTTTCACCGATCGTTA
+TGGCGGCTATCATGGCAGCAGTCGCCGGCATTATGGTGGCGCTCTCCGTCGATGAACTGA
+TGCCGTTGGCAAAAGAGATCGATCCTAACAATAACCCCAGCTATGGTGTGCTTTGCGGTA
+TGTCCATCATGGGGCTCAGTCTCGTCATTTTGCAGACGATAGGTATCGGTTAA
+>BBBB#75_01314
+ATGTCAGTACCACTTATTCTGACCTTACTGGCGGGCGCTGCCACCTTTATTGGCGCGTTT
+CTTGGCGTTCTTGGCCAAAAACCGTCTAACCGCGTGCTGGCTTTTTCGCTGGGCTTCGCC
+GCAGGGATCATGCTGCTCATCTCGCTGATGGATGCTGCCCGCCGCGTTAGATACCGAGGG
+GATGTCGCCTGTACTGGGCTACGGGATGTTTATTATCGGCCTGTTGGGCTACTTCGGGCT
+GGATCGTCTGCTTCCTCACGCTCATCCGCAGGATCTGGTGCAAAAAAGGCAGCAGCCGCT
+TCCCGGCTCGATAAAACGCACTGCGATTTTATTGACGCTCGGCATTAGCCTGCACAACTT
+TCCGGAAGGAATCGCCACCTTTGTCACTGCCAGCAGCAATCTTGAACTGGGTTTCGGCAT
+CGCACTGGCGGTGGCGTTGCACAATATTCCTGAAGGGCTGGCGGTTGCCGGCCCGGTTTA
+TGCCGCGACGGGCTCAAAACGTACCGCGATTTTTTGGGCCGGTATCTCCGGCATGGCGGA
+AATTCTTGGCGGCGTGCTGGCGTGGCTGATTTTGGGCAGCCTGGTTTCACCGATCGTTAT
+GGCGGCTATCATGGCAGCAGTCGCCGGCATTATGGTGGCGCTCTCCGTCGATGAACTGAT
+GCCGTTGGCAAAAGAGATCGATCCTAACAATAACCCCAGCTATGGTGTGCTTTGCGGTAT
+GTCCATCATGGGGCTCAGTCTCGTCATTTTGCAGACGATAGGTATCGGTTAA
+>CCCC#76_00877
+ATGTCAGTACCACTTATTCTGACCTTACTGGCGGGCGCTGCCACCTTTATTGGCGCGTTT
+CTTGGCGTTCTTGGCCAAAAACCGTCTAACCGCGTGCTGGCTTTTTCGCTGGGCTTCGCC
+GCAGGGATCATGCTGCTCATCTCGCTGATGGAGATGCTGCCCGCCGCGTTAGATACCGAG
+GGGATGTCGCCTGTACTGGGCTACGGGAGTTTATTATCGGCCTGTTGGGCTACTTCGGGC
+TGGATCGTCTGCTTCCTCACGCTCATCCGCAGGATCTGGTGCAAAAAAGGCAGCAGCCGC
+TTCCCGGCTCGATAAAACGCACTGCGATTTTATTGACGCTCGGCATTAGCCTGCACAACT
+TTCCGGAAGGAATCACCTTTGTCACTGCCAGCAGCAATCTTGAACTGGGTTTCGGCATCG
+CACTGGCGGTGGCGTTGCACAATATTCCTGAAGGGCTGGCGGTTGCCGGCCCGGTTTATG
+CCGCGACGGGCTCAAAACGTACCGCGATTTTTTGGGCCGGTATCTCCGGCATGGCGGAAA
+TTCTTGGCGGCGTGCTGGCGTGGCTGATTTTGGGCAGCCTGGTTTCACCGATCGTTATGG
+CGGCTATCATGGCAGCAGTCGCCGGCATTATGGTGGCGCTCTCCGTCGATGAACTGATGC
+CGTTGGCAAAAGAGATCGATCCTAACAATAACCCCAGCTATGGTGTGCTTTGCGGTATGT
+CCATCATGGGGCTCAGTCTCGTCATTTTGCAGACGATAGGTATCGGTTAA
+>DDDD#77_01105
+ATGTCAGTACCACTTATTCTGACCTTACTGGCGGGCGCTGCCACCTTTATTGGCGCGTTT
+CTTGGCGTTCTTGGCCAAAAACCGTCTAACCGCGTGCTGGCTTTTTCGCTGGGCTTCGCC
+GCAGGGATCATGCTGCTCATCTCGCTGATGGAGATGCTGCCCGCCGCGTTAGATACCGAG
+GGGATGTCGCCTGTACTGGGCTACGGGATGTTTATTATCGGCCTGTTGGGCTACTTCGGG
+CTGGATCGTCTGCTTCCTCACGCTCATCCGCAGGATCTGGTGCAAAAAAGGCAGCAGCCG
+CTTCCCGGCTCGATAAAACGCACTGCGATTTTATTGACGCTCGGCATTAGCCTGCACAAC
+TTTCCGGAAGGAATCGCCACCTTTGTCACTGCCAGCAGCAATCTTGAACTGGGTTTCGGC
+ATCGCACTGGCGGTGGCGTTGCACAATATTCCTGAAGGGCTGGCGGTTGCCGGCCCGGTT
+TATGCCGCGACGGGCTCAAAACGTACCGCGATTTTTTGGGCCGGTATCTCCGGCATGGCG
+GAAATTCTTGGCGGCGTGCTGGCGTGGCTGATTTTGGGCAGCCTGGTTTCACCGATCGTT
+ATGGCGGCTATCATGGCAGCAGTCGCCGGCATTATGGTGGCGCTCTCCGTCGATGAACTG
+ATGCCGTTGGCAAAAGAGATCGATCCTAACAATAACCCCAGCTATGGTGTGCTTTGCGGT
+ATGTCCATCATGGGGCTCAGTCTCGTCATTTTGCAGACGATAGGTATCGGTTAA
+>EEEE
+ATGTCAGTACCACTTATTCTGACCTTACTGGCGGGCGCTGCCACCTTTATTGGCGCGTTT
+CTTGGCGTTCTTGGCCAAAAACCGTCTAACCGCGTGCTGGCTTTTTCGCTGGGCTTCGCC
+GCAGGGATCATGCTGCTCATCTCGCTGATGGAGATGCTGCCCGCCGCGTTAGATACCGAG
+GGGATGTCGCCTGTACTGGGCTACGGGATGTTTATTATCGGCCTGTTGGGCTACTTCGGG
+CTGGATCGTCTGCTTCCTCACGCTCATCCGCAGGATCTGGTGCAAAAAAGGCAGCAGCCG
+CTTCCCGGCTCGATAAAACGCACTGCGATTTTATTGACGCTCGGCATTAGCCTGCACAAC
+TTTCCGGAAGGAATCGCCACCTTTGTCACTGCCAGCAGCAATCTTGAACTGGGTTTCGGC
+ATCGCACTGGCGGTGGCGTTGCACAATATTCCTGAAGGGCTGGCGGTTGCCGGCCCGGTT
+TATGCCGCGACGGGCTCAAAACGTACCGCGATTTTTTGGGCCGGTATCTCCGGCATGGCG
+GAAATTCTCGGCGTGCTGGCGTGGCTGATTTTGGGCAGCCTGGTTTCACCGATCGTTATG
+GCGGCTATCATGGCAGCAGTCGCCGGCATTATGGTGGCGCTCTCCGTCGATGAACTGATG
+CCGTTGGCAAAAGAGATCGATCCTAACAATAACCCCAGCTATGGTGTGCTTTGCGGTATG
+TCCATCATGGGGCTCAGTCTCGTCATTTTGCAGACGATAGGTATCGGTTAA
+>FFFF
+ATGTCAGTACCACTTATTCTGACCTTACTGGCGGGCGCTGCCACCTTTATTGGCGCGTTT
+CTTGGCGTTCTTGGCCAAAAACCGTCTAACCGCGTGCTGGCTTTTTCGCTGGGCTTCGCC
+GCAGGGATCATGCTGCTCATCTCGCTGATGGAGATGCTGCCCGCCGCGTTAGATACCGAG
+GGGATGTCGCCTGTACTGGGCTACGGGATGTTTATTATCGGCCTGTTGGGCTACTTCGGG
+CTGGATCGTCTGCTTCCTCACGCTCATCCGCAGGATCTGGTGCAAAAAAGGCAGCAGCCG
+CTTCCCGGCTCGATAAAACGCACTGCGATTTTATTGACGCTCGGCATTAGCCTGCACAAC
+TTTCCGGAAGGAATCGCCACCTTTGTCACTGCCAGCAGCAATCTTGAACTGGGTTTCGGC
+ATCGCACTGGCGGTGGCGTTGCACAATATTCCTGAAGGGCTGGCGGTTGCCGGCCCGGTT
+TATGCCGCGACGGGCTCAAAACGTACCGCGATTTTTTGGGCCGGTATCTCCGGCATGGCG
+GAAATTCTTGGCGGCGTGCTGGCGTGGCTGATTTTGGGCAGCCTGGCACCGATCGTTATG
+GCGGCTATCATGGCAGCAGTCGCCGGCATTATGGTGGCGCTCTCCGTCGATGAACTGATG
+CCGTTGGCAAAAGAGATCGATCCTAACAATAACCCCAGCTATGGTGTGCTTTGCGGTATG
+TCCATCATGGGGCTCAGTCTCGTCATTTTGCAGACGATAGGTATCGGTTAA
+>GGGG
+ATGTCAGTACCACTTATTCTGACCTTACTGGCGGGCGCTGCCACCTTTATTGGCGCGTTT
+CTTGGCGTTCTTGGCCAAAAACCGTCTAACCGCGTGCTGGCTTTTTCGCTGGGCTTCGCC
+GCAGGGATCATGCTGCTCATCTCGCTGATGGAGATGCTGCCCGCCGCGTTAGATACCGAG
+GGGATGTCGCCTGTACTGGGCTACGGGATGTTTATTATCGGCCTGTTGGGCTACTTCGGG
+CTGGATCGTCTGCTTCCTCACGCTCATCCGCAGGATCTGGTGCAAAAAAGGCAGCAGCCG
+CTTCCCGGCTCGATAAAACGCACTGCGATTTTATTGACGCTCGGCATTAGCCTGCACAAC
+TTTCCGGAAGGAATCGCCACCTTTGTCACTGCCAGCAGCAATCTTGAACTGGGTTTCGGC
+ATCGCACTGGGGTGGCGTTGCACAATATTCCTGAAGGGCTGGCGGTTGCCGGCCCGGTTT
+ATGCCGCGACGGGCTCAAAACGTACCGCGATTTTTTGGGCCGGTATCTCCGGCATGGCGG
+AAATTCTTGGCGGCGTGCTGGCGTGGCTGATTTTGGGCAGCCTGGTTTCACCGATCGTTA
+TGGCGGCTATCATGGCAGCAGTCGCCGGCATTATGGTGGCGCTCTCCGATGAACTGATGC
+CGTTGGCAAAAGAGATCGATCCTAACAATAACCCCAGCTATGGTGTGCTTTGCGGTATGT
+CCATCATGGGGCTCAGTCTCGTCATTTTGCAGACGATAGGTATCGGTTAA
+>HHHH
+ATGTCAGTACCACTTATTCTGACCTTACTGGCGGGCGCTGCCACCTTTATTGGCGCGTTT
+CTTGGCGTTCTTGGCCAAAAACCGTCTAACCGCGTGCTGGCTTTTTCGCTGGGCTTCGCC
+GCAGGGATCATGCTGCTCATCTCGCTGATGGAGATGCTGCCCGCCGCGTTAGATACCGAG
+GGGATGTCGCCTGTACTGGGCTACGGGATGTTTATTATCGGCCTGTTGGGCTACTTCGGG
+CTGGATCGTCTGCTTCCTCACGCTTCCGCAGGATCTGGTGCAAAAAAGGCAGCAGCCGCT
+TCCCGGCTCGATAAAACGCACTGCGATTTTATTGACGCTCGGCATTAGCCTGCACAACTT
+TCCGGAAGGAATCGCCACCTTTGTCACTGCCAGCAGCAATCTTGAACTGGGTTTCGGCAT
+CGCACTGGCGGTGGCGTTGCACAATATTCCTGAAGGGCTGGCGGTTGCCGGCCCGGTTTA
+TGCCGCGACGGGCTCAAAACGTACCGCGATTTTTTGGGCCGGTATCTCCGGCATGGCGGA
+AATTCTTGGCGGCGTGCTGGCGTGGCTGATTTTGGGCAGCCTGGTTTCACCGATCGTTAT
+GGCGGCTATCATGGCAGCAGTCGCCGGCATTATGGTGGCGCTCTCCGTCGATGAACTGAT
+GCCGTTGGCAAAAGAGATCGATCCTAACAATAACCCCAGCTATGGTGTGCTTTGCGGTAT
+GTCCATCATGGGGCTCAGTCTCGTCATTTTGCAGACGATAGGTATCGGTTAA