--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/roary_plots.xml	Fri May 14 20:27:06 2021 +0000
@@ -0,0 +1,29 @@
+<tool id="roary_plots" name="Roary plots" version="1.0">
+  <description>Generate plots from Roary outputs</description>
+ <requirements>
+	 <requirement type="package" version="3.4.2">matplotlib</requirement>
+	 <requirement type="package" version="1.20.2">numpy</requirement>
+	 <requirement type="package" version="1.2.4">pandas</requirement>
+	 <requirement type="package" version="0.11.1">seaborn</requirement>
+</requirements>
+
+  <command interpreter="perl">roary_plots.sh $tree $input $heatmap
+</command>
+
+ 
+  <inputs>
+  <param format="tabular" name="input" type="data" label="Gene Presence Absence matrix"/>
+  <param format="newick" name="tree" type="data" label="Newick"/>
+   
+ </inputs>
+
+ <outputs>  
+	 <data format="png" name="heatmap" label="Heatmap tree"/>
+</outputs>
+
+  <help>
+ For full documentation, please go to the Roary plots website : https://github.com/sanger-pathogens/Roary/tree/master/contrib/roary_plots 
+	  
+</help>
+
+</tool>