Mercurial > repos > dereeper > roary_plots
view Roary/t/Bio/Roary/CommandLine/RoaryCoreAlignment.t @ 0:c47a5f61bc9f draft
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author | dereeper |
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date | Fri, 14 May 2021 20:27:06 +0000 |
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#!/usr/bin/env perl use Moose; use Data::Dumper; use Cwd; BEGIN { unshift( @INC, './lib' ) } BEGIN { unshift( @INC, './t/lib' ) } with 'TestHelper'; BEGIN { use Test::Most; use_ok('Bio::Roary::CommandLine::RoaryCoreAlignment'); } my $script_name = 'Bio::Roary::CommandLine::RoaryCoreAlignment'; system('touch empty_file'); my %scripts_and_expected_files = ( '-m t/data/core_alignment -s t/data/core_alignment.csv' => [ 'core_gene_alignment.aln', 't/data/expected_core_gene_alignment.aln' ], '-m t/data/core_alignment -s t/data/core_alignment_core0.66.csv --core_definition 0.66' => [ 'core_gene_alignment.aln', 't/data/expected_core_gene_alignment_core0.66.aln' ], '-h' => [ 'empty_file', 't/data/empty_file' ], ); mock_execute_script_and_check_output( $script_name, \%scripts_and_expected_files ); done_testing();