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view Roary/t/data/expected_mafft_input.fa.aln @ 0:c47a5f61bc9f draft

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author dereeper
date Fri, 14 May 2021 20:27:06 +0000
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>1111#5_04506
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---------atggcaatcaccttacgggagctggatggcctgagctatgaagagatagcg
gctatcatggattgtccggtggggacggtgcgttcacgtatcttccgggcgcgggaagct
attgataataaagttcaaccgcttatcaggcgttga
>1234_8#75_04759
atgagcgagcagttaacggaccaggtcctggttgaacgggtccagaagggagatcagaaa
gcctttaacttactggtagtgcgctaccagcataaagtggcgagtctggtttcccgctat
gtgccatcgggcgacgttcccgatgtcgtacaggaatcatttattaaggcctatcgcgcg
ctggattctttccggcgggatagtgctttttatacctggttgtatcgtattgcggtcaat
accgcgaagaactacctggttgcgcaggggcgtcgtccgccttccagtgatgtagacgcg
attgaagcagaaaactttgaaagcggcggcgcgctgaaagaaatttcgaaccctgagaac
ttaatgttgtcagaagaactgagacagatagttttccgaactattgagtccctcccggaa
gatttacgtatggcaatcaccttacgggagctggatggcctgagctatgaagagatagcg
gctatcatggattgtccggtggggacggtgcgttcacgtatcttccgggcgcgggaagct
attgataataaagttcaaccgcttatcaggcgttga
>Salmonella_enterica_subsp_enterica_serovar_Typhimurium_DT104_v1_02853
atgagcgagcagttaacggaccaggtcctggttgaacgggtccagaagggagatcagaaa
gcctttaacttactggtagtgcgctaccagcataaagtggcgagtctggtttcccgctat
gtgccatcgggcgacgttcccgatgtcgtacaggaatcatttattaaggcctatcgcgcg
ctggattctttccggggggatagtgctttttatacctggttgtatcgtattgcggtcaat
accgcgaagaactacctggttgcgcaggggcgtcgtccgccttccagtgatgtagacgcg
attgaagcagaaaactttgaaagcggcggcgcgctgaaagaaatttcgaaccctgagaac
ttaatgttttcagaagaactgagacagatagttttccgaactattgagtccctcccggaa
gatttacgtatggcaatcaccttacgggagctggatggcctgagctatgaagagatagcg
gctatcatggattgtccggtggggacggtgcgttcacgtatcttccgggcgcgggaagct
attgataataaagttcaaccgcttatcaggcgttga
>Salmonella_enterica_subsp_enterica_serovar_Typhimurium_SL1344_v2_02736
atgagcgagcagttaacggaccaggtcctggttgaacgggtccagaagggagatcagaaa
gcctttaacttactggtagtgcgctaccagcataaagtggcgagtctggtttcccgctat
gtgccatcgggcgacgttcccgatgtcgtacaggaatcatttattaaggcctatcgcgcg
ctggattctttccggggggatagtgctttttatacctggttgtatcgtattgcggtcaat
accgcgaagaactacctggttgcgcaggggcgtcgtccgccttccagtgatgtagacgcg
attgaagcagaaaactttgaaagcggcggcgcgctgaaagaaatttcgaaccctgagaac
ttaatgttgtcagaagaactgagacagatagttttccgaactattgagtccctcccggaa
gatttacgtatggcaatcaccttacgggagctggatggcctgagctgtgaagagatagcg
gctatcatggattgtccggtggggacggtgcgttcacgtatcttccgggcgcgggaagct
attgataataaagttcaaccgcttatcaggcgttga
>Salmonella_enterica_subsp_enterica_serovar_Typhimurium_str_D23580_v1_02783
atgagcgagcagttaacggaccaggtcctggttgaacgggtccagaagggagatcagaaa
gcctttaacttactggtagtgcgctaccagcataaagtggcgagtctggtttcccgctat
gtgccatcgggcgacgttcccgatgtcgtacaggaatcatttattaaggcctatcgcgcg
ctggattctttccggggggatagtgctttttatacctggttgtatcgtattgcggtcaat
accgcgaagaactacctggttgcgcaggggcgtcgtccgccttccagtgatgtagacgcg
attgaagcagaaaactttgaaagcggcggcgcgctgaaagaaatttcgaaccctgagaac
ttaatgttgtcagaagaactgagacagatagttttccgaactattgagtccctcccggaa
gatttacgtatggcaatcaccttacgggagctggatggcctgagctatgaagagatagcg
gctatcatggattgtccggtggggacggtgcgttcacgtatcttccgggcgcgggaagct
attgataataaagttcaaccgcttatcaggcgttga
>Salmonella_enterica_subsp_enterica_serovar_Typhimurium_str_DT2_v1_02741
atgagcgagcagttaacggac---gtcctggttgaacgggtccagaagggagatcagaaa
gcctttaacttactggtagtgcgctaccagcataaagtggcgagtctggtttcccgctat
gtgccatcgggcgacgttcccgatgtcgtacaggaatcatttattaaggcctatcgcgcg
ctggattctttccggggggatagtgctttttatacctggttgtatcgtattgcggtcaat
accgcgaagaactacctggttgcgcaggggcgtcgtccgccttccagtgatgtagacgcg
attgaagcagaaaactttgaaagcggcggcgcgctgaaagaaatttcgaaccctgagaac
ttaatgttgtcagaagaactgagacagatagttttccgaactattgagtccctcccggaa
gatttacgtatggcaatcaccttacgggagctggatggcctgagctatgaagagatagcg
gctatcatggattgtccggtggggacggtgcgttcacgtatcttccgggcgcgggaagct
attgataataaagttcaaccgcttatcaggcgttga