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view Roary/t/data/expected_nuc_multifasta.fa.aln @ 0:c47a5f61bc9f draft

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author dereeper
date Fri, 14 May 2021 20:27:06 +0000
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>1
ATGCAAATACAGAGCTTCTATCACTCAGCTTCACTAAAAACCCAGGAGGCTTTTAAAAGC
CTACAAAAAACCTTATACAACGGAATGCAGATTCTCTCAGGCCAGGGCAAAGCGCCGGCT
AAAGCGCCCGACGCTCGCCCGGAAATTATTGTCCTGCGAGAACCTGGCGCGACATGGGGG
AATTATCTACAGCATCAGAAGACGTCTAACCACTCGCTGCATAACCTCTATAACTTACAG
CGCGATCTTCTTACCGTCGCGGCAACCGTTCTGGGTAAACAAGACCCGGTTCTAACGTCA
ATGGCAAACCAAATGGAGTTAGCCAAAGTTAAAGCGGACCGGCCAGCAACAAAACAAGAA
GAAGCTGCGGCAAAAGCATTGAAGAAAAATCTTATCGAACTTATTGCAGCACGCACTCAG
CAGCAAAATGGCTTACCTGCAAAAGAAGCTCATCGCTTTGCGGCAGTAGCGTTTAGAGAT
GCTCAGGTCAAGCAGCTCAATAACCAGCCCTGGCAAACCATAAAAAATACACTCACGCAT
AACGGGCATCACTATACCAACACGCAGCTCCCTGCCGCAGAGATGAAAATCGGCGCAAAA
GATATCTTTCCCAGTGCTTATGAGGGAAAGGGCGTATGCAGTTGGGATACCAAGAATATT
CATCACGCCAATAATTTGTGGATGTCCACGGTGAGTGTGCATGAGGACGGTAAAGATAAA
ACGCTTTTTTGCGGGATACGTCATGGTGTGCTTTCCCCCTATCATGAAAAAGATCCGCTT
CTGCGTCAGGCCGGCGCTGAAAACAAAGCCAAAGAAGTATTAGCTGCGGCACTTTTTAGT
AAACCTGAGTTGCTTAACAGAGCCTTAGAGGGCGAAGCGGTAAGCCTGAAACTGGTATCC
GTCGGGTTACTCACCGCGTCGAATATTTTCGGCAAAGAGGGAACTATGGTCGAGGATCAA
ATGCGCGCATGGCAATCGTTGACCCAGCCGGGAAAAATGATTCATTTAAAAATCCGCAAT
AAAGATGGCGATCTACAGACGGTAAAAATAAAACCGGACGTCGCCGCATTTAATGTGGGT
GTTAATGAGCTGGCGCTCAAGCTCGGCTTTGGCCTTAAAGCATCAGATAGCTATAATGCC
GAAGCGCTGCATCAGTTATTAGGCAATGATTTACGCCCTGAAGCCAGACCAGGTGGCTGG
GTTGGCGAATGGCTGGCGCAATACCCGGATAATTATGAGGTCGTCAATACATTAGCGCGC
CAGATTAAGGATATCTGGAAAAATAACCAACATCATAAAGATGGCGGCGAACCCTATAAA
CTCGCACAACGCCTTGCCATGTTAGCCCATGAAATTGACGCGGTGCCCGCCTGGAATTGT
AAAAGCGGCAAAGATCGTACAGGGATGATGGATTCAGAAATCAAGCGAGAGCTCATTTCT
TTCCATCAGACCCATATGTTAAGTGCGCCTGGTAGTCTTCCGGATAGCGGTGGACAGAAA
ATTTTCCAAAAAGTATTACTGAATAGCGGTAACCTGGAGATTCAGAAACAAAATACGGGC
GGGGCGGGAAACAAAGTAATGAAAAATTTATCGCCAGAGGTGCTCAATCTTTCCTATCAA
AAACGAGTTGGGGATGAAAATATTTGGCGTCAG------NNNAATATTTCTTCATTAATC
ACATCT
>2
ATGCAAATACAGAGCTTCTATCACTCAGCTTCACTAAAAACCCAGGAGGCTTTTAAAAGC
CTACAAAAAACCTTATACAACGGAATGCAGATTCTCTCAGGCCAGGGCAAAGCGCCGGCT
AAAGCGCCCGACGCTCGCCCGGAAATTATTGTCCTGCGAGAACCTGGCGCGACATGGGGG
AATTATCTACAGCATCAGAAGACGTCTAACCACTCGCTGCATAACCTCTATAACTTACAG
CGCGATCTTCTTACCGTCGCGGCAACCGTTCTGGGTAAACAAGACCCGGTTCTAACGTCA
ATGGCAAACCAAATGGAGTTAGCCAAAGTTAAAGCGGACCGGCCAGCAACAAAACAAGAA
GAAGCTGCGGCAAAAGCATTGAAGAAAAATCTTATCGAACTTATTGCAGCACGCACTCAG
CAGCAAAATGGCTTACCTGCAAAAGAAGCTCATCGCTTTGCGGCAGTAGCGTTTAGAGAT
GCTCAGGTCAAGCAGCTCAATAACCAGCCCTGGCAAACCATAAAAAATACACTCACGCAT
AACGGGCATCACTATACCAACACGCAGCTCCCT---GCAGAGATGAAAATCGGCGCAAAA
GATATCTTTCCCAGTGCTTATGAGGGAAAGGGCGTATGCAGTTGGGATACCAAGAATATT
CATCACGCCAATAATTTGTGGGTGTCCACGGTGAGTGTGCATGAGGACGGTAAAGATAAA
ACGCTTTTTTGCGGGATACGTCATGGTGTGCTTTCCCCCTATCATGAAAAAGATCCGCTT
CTGCGTCAGGCCGGCGCTGAAAACAAAGCCAAAGAAGTATTAGCTGCGGCACTTTTTAGT
AAACCTGAGTTGCTTAACAGAGCCTTAGAGGGCGAAGCGGTAAGCCTGAAACTGGTATCC
GTCGGGTTACTCACCGCGTCGAATATTTTCGGCAAAGAGGGAACTATGGTCGAGGATCAA
ATGCGCGCATGGCAATCGTTGACCCAGCCGGGAAAAATGATTCATTTAAAAATCCGCAAT
AAAGATGGCGATCTACAGACGGTAAAAATAAAACCGGACGTCGCCGCATTTAATGTGGGT
GTTAATGAGCTGGCGCTCAAGCTCGGCTTTGGCCTTAAAGCATCAGATAGCTATAATGCC
GAAGCGCTACATCAGTTATTAGGCAATGATTTACGCCCTGAAGCCAGACCAGGTGGCTGG
GTTGGCGAATGGCTGGCGCAATACCCGGATAATTATGAGGTCGTCAATACATTAGCGCGC
CAGATTAAGGATATCTGGAAAAATAACCAACATCATAAAGATGGCGGCGAACCCTATAAA
CTCGCACAACGCCTTGCCATGTTAGCCCATGAAATTGACGCGGTGCCCGCCTGGAATTGT
AAAAGCGGCAAAGATCGTACAGGGATGATGGATTCAGAAATCAAGCGAGAGCTCATTTCT
TTCCATCAGACCCATATGTTAAGTGCGCCTGGTAGTCTTCCGGATAGCGGTGGACAGAAA
ATTTTCCAAAAAGTATTACTGAATAGCGGTAACCTGGAGATTCAGAAACAAAATACGGGC
GGGGCGGGAAACAAAGTAATGAAAAATTTATCGCCAGAGGTGCTCAATCTTTCCTATCAA
AAACGAGTTGGGGATGAAAATATTTGG---CAGTCAGTAAAAGGTATTTCTTCATTAATC
ACATCT
>3
ATGCAAATACAGAGCTTCTATCACTCAGCTTCACTAAAAACCCAGGAGGCTTTTAAAAGC
CTACAAAAAACCTTATACAACGGAATGCAGATTCTCTCAGGCCAGGGCAAAGCGCCGGCT
AAAGCGCCCGACGCTCGCCCGGAAATTATTGTCCTGCGAGAACCTGGCGCGACATGGGGG
AATTATCTACAGCATCAGAAGACGTCTAACCACTCGCTGCATAACCTCTATAACTTACAG
CGCGATCTTCTTACCGTCGCGGCAACCGTTCTGGGTAAACAAGACCCGGTTCTAACGTCA
ATGGCAAACCAAATGGAGTTAGCCAAGGTTAAAGCGGACCGGCCAGCAACAAAACAAGAA
GAAGCTGCGGCAAAAGCATTGAAGAAAAATCTTATCGAACTTATTGCAGCACGCACTCAG
CAGCAAAATGGCTTACCTGCAAAAGAAGCTCATCGCTTTGCGGCAGTAGCGTTTAGAGAT
GCTCAGGTCAAGCAGCTCAATAACCAGCCCTGGCAAACCATAAAAAATACACTCACGCAT
AACGGGCATCACTATACCAACACGCAGCTCCCTGCCGCAGAGATGAAAATCGGCGCAAAA
GATATCTTTCCCAGTGCTTATGAGGGAAAGGGCGTATGCAGTTGGGATACCAAGAATATT
CATCACGCCAATAATTTGTGGATGTCCACGGTGAGTGTGCATGAGGACGGTAAAGATAAA
ACGCTTTTTTGCGGGATACGTCATGGTGTGCTTTCCCCCTATCATGAAAAAGATCCGCTT
CTGCGTCAGGCCGGCGCTGAAAACAAAGCCAAAGAAGTATTAGCTGCGGCACTTTTTAGT
AAACCTGAGTTGCTTAACAGAGCCTTAGAGGGCGAAGCGGTAAGCCTGAAACTGGTATCC
GTCGGGTTACTCACCGCGTCGAATATTTTCGGCAAAGAGGGAACTATGGTCGAGGATCAA
ATGCGCGCATGGCAATCGTTGACCCAGCCGGGAAAAATGATTCATTTAAAAATCCGCAAT
AAAGATGGCGATCTACAGACGGTAAAAATAAAACCGGACGTCGCCGCATTTAATGTGGGT
GTTAATGAGCTGGCGCTCAAGCTCGGCTTTGGCCTTAAAGCATCAGATAGCTATAATGCC
GAAGCGCTACATCAGTTATTAGGCAATGATTTACGCCCTGAAGCCAGACCAGGTGGCTGG
GTTGGCGAATGGCTGGCGCAATACCCGGATAATTATGAGGTCGTCAATACATTAGCGCGC
CAGATTAAGGATATCTGGAAAAATAACCAACATCATAAAGATGGCGGCGAACCCTATAAA
CTCGCACAACGCCTTGCCATGTTAGCCCATGAAATTGACGCGGTGCCCGCCTGGAATTGT
AAAAGCGGCAAAGATCGTACAGGGATGATGGATTCAGAAATCAAGCGAGAGCTCATTTCT
TTCCATCAGACCCATATGTTAAGTGCGCCTGGTAGTCTTCCGGATAGCGGTGGACAGAAA
ATTTTCCAAAAAGTATTACTGAATAGCGGTAACCTGGAGATTCAGAAACAAAATACGGGC
GGGGCGGGAAACAAAGTAATGAAAAATTTATCGCCAGAGGTGCTCAATCTTTCCTATCAA
AAACGAGTTGGGGATGAAAATATTTGG---CAGTCAGTAAAAGGTATTTCTTCATTAATC
ACATCT