annotate hapmap2mlmm/HapmapToMLMMFiles.sh @ 11:15b23cdde685 draft

planemo upload commit 305985afd3b7c3d47f531149c2f1a279af2d12aa-dirty
author dereeper
date Fri, 20 Apr 2018 09:04:25 -0400
parents 420b57c3c185
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
420b57c3c185 Uploaded
dereeper
parents:
diff changeset
1 #!/bin/bash
420b57c3c185 Uploaded
dereeper
parents:
diff changeset
2 hapmap=$1
420b57c3c185 Uploaded
dereeper
parents:
diff changeset
3 map=$2
420b57c3c185 Uploaded
dereeper
parents:
diff changeset
4 geno=$3
420b57c3c185 Uploaded
dereeper
parents:
diff changeset
5
420b57c3c185 Uploaded
dereeper
parents:
diff changeset
6 directory=`dirname $0`
420b57c3c185 Uploaded
dereeper
parents:
diff changeset
7
420b57c3c185 Uploaded
dereeper
parents:
diff changeset
8 perl $directory/HapmapToMLMMFiles.pl -h $hapmap -g $geno -m $map -p $directory
420b57c3c185 Uploaded
dereeper
parents:
diff changeset
9
420b57c3c185 Uploaded
dereeper
parents:
diff changeset
10
420b57c3c185 Uploaded
dereeper
parents:
diff changeset
11