Mercurial > repos > dereeper > sniplay
view check_gwas_inputs/CheckGWASInputs.sh @ 4:10627af23f10 draft
planemo upload
author | gandres |
---|---|
date | Tue, 15 Dec 2015 05:18:02 -0500 |
parents | 420b57c3c185 |
children |
line wrap: on
line source
#!/bin/bash hapmap=$1 trait=$2 out_hapmap=$3 out_trait=$4 stats=$5 directory=`dirname $0` mkdir tmpdir$$ #cp -rf $input tmpdir$$/input perl $directory/CheckGWASInputs.pl -h $hapmap -t $trait -o tmpdir$$/out >>$stats 2>&1 mv tmpdir$$/out.hapmap $out_hapmap mv tmpdir$$/out.trait $out_trait