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view SNP_density/calculateSlidingWindowsSNPdensitiesFromHapmap.sh @ 1:420b57c3c185 draft

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author dereeper
date Fri, 10 Jul 2015 04:39:30 -0400
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#!/bin/bash

tool_path=$(dirname $0)
hapmap=$1
fileout=$2
fileout_bysample=$3
step=$4

perl $tool_path/CalculateSlidingWindowsSNPdensitiesFromHapmap.pl -i $hapmap -o $fileout -s $step

cp  $fileout.by_sample $fileout_bysample
rm $fileout.by_sample