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view SNP_density/calculateSlidingWindowsSNPdensitiesFromVCF.sh @ 15:31c23d943c29 draft default tip

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author dereeper
date Tue, 08 Jan 2019 08:47:56 -0500
parents ebb0ac9b6fa9
children
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#!/bin/bash

tool_path=$(dirname $0)
input=$1
fileout=$2
fileout_bysample=$3
step=$4

perl $tool_path/CalculateSlidingWindowsSNPdensitiesFromVCF.pl -i $input -o $fileout -s $step

cp  $fileout.by_sample $fileout_bysample
rm $fileout.by_sample