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5
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1
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2 VCFtools - v0.1.12b
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3 (C) Adam Auton and Anthony Marcketta 2009
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4
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5 Parameters as interpreted:
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6 --vcf /w/galaxy/galaxy4gwen/galaxy-dist/database/files/000/dataset_21.dat
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7 --chr chr1
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8 --recode-INFO-all
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9 --maf 0.001
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10 --max-alleles 4
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11 --max-maf 0.5
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12 --min-alleles 2
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13 --max-missing 1
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14 --out filtered
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15 --recode
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16 --remove-filtered-all
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17
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18 After filtering, kept 1 out of 1 Individuals
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19 Outputting VCF file...
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20 After filtering, kept 3616 out of a possible 4955 Sites
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21 Run Time = 0.00 seconds
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