view uniqprimer-0.5.0/nucmer_alignments.coords @ 6:8218425fda1d draft default tip

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author dereeper
date Tue, 04 Jan 2022 16:05:55 +0000
parents 3249d78ecfc2
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/homedir/galaxy/shed_tools/galaxy.southgreen.fr/toolshed/repos/dereeper/uniqprimer/631882b4244e/uniqprimer/uniqprimer-0.5.0/data/Xoc_BLS256.fasta /homedir/galaxy/shed_tools/galaxy.southgreen.fr/toolshed/repos/dereeper/uniqprimer/631882b4244e/uniqprimer/uniqprimer-0.5.0/tmpz0OJOq/tempSequences.fasta
NUCMER

    [S1]     [E1]  |     [S2]     [E2]  |  [LEN 1]  [LEN 2]  |  [% IDY]  | [TAGS]
=====================================================================================
   67528    69135  |     4241     5848  |     1608     1608  |    98.26  | gi|868566092|ref|NC_017267.2|	seq_126
   72101    73244  |        1     1144  |     1144     1144  |    99.39  | gi|868566092|ref|NC_017267.2|	seq_54
   88411    89039  |        1      629  |      629      629  |    99.68  | gi|868566092|ref|NC_017267.2|	seq_55
  475277   477524  |     9615     7376  |     2248     2240  |    95.33  | gi|868566092|ref|NC_017267.2|	seq_126
  475277   477120  |     1844        1  |     1844     1844  |    95.88  | gi|868566092|ref|NC_017267.2|	seq_273
  476847   477524  |      935      266  |      678      670  |    96.17  | gi|868566092|ref|NC_017267.2|	seq_129
  791641   792784  |        1     1144  |     1144     1144  |    99.65  | gi|868566092|ref|NC_017267.2|	seq_54
 1445967  1447021  |     1057        1  |     1055     1057  |    99.15  | gi|868566092|ref|NC_017267.2|	seq_2
 1688199  1688875  |      266      935  |      677      670  |    96.75  | gi|868566092|ref|NC_017267.2|	seq_129
 2011235  2013180  |     1946        1  |     1946     1946  |    95.84  | gi|868566092|ref|NC_017267.2|	seq_273
 2011335  2013585  |     9617     7376  |     2251     2242  |    95.60  | gi|868566092|ref|NC_017267.2|	seq_126
 2018762  2019833  |     4926     3855  |     1072     1072  |    98.97  | gi|868566092|ref|NC_017267.2|	seq_116
 2018942  2019835  |     1136      243  |      894      894  |    98.99  | gi|868566092|ref|NC_017267.2|	seq_96
 2343460  2347223  |     3789        1  |     3764     3789  |    97.89  | gi|868566092|ref|NC_017267.2|	seq_116
 2348101  2357453  |     9353        1  |     9353     9353  |    97.16  | gi|868566092|ref|NC_017267.2|	seq_113
 2363803  2368395  |     4604        1  |     4593     4604  |    98.07  | gi|868566092|ref|NC_017267.2|	seq_107
 2394983  2395425  |      443        1  |      443      443  |    99.32  | gi|868566092|ref|NC_017267.2|	seq_168
 2508983  2511231  |     7376     9617  |     2249     2242  |    95.38  | gi|868566092|ref|NC_017267.2|	seq_126
 2509386  2511534  |        1     2149  |     2149     2149  |    95.58  | gi|868566092|ref|NC_017267.2|	seq_273
 2913061  2914164  |       41     1144  |     1104     1104  |    99.73  | gi|868566092|ref|NC_017267.2|	seq_54
 2913061  2914164  |       57     1160  |     1104     1104  |    99.64  | gi|868566092|ref|NC_017267.2|	seq_87
 3038349  3038977  |        1      629  |      629      629  |    99.52  | gi|868566092|ref|NC_017267.2|	seq_55
 3899121  3900177  |        1     1057  |     1057     1057  |    99.24  | gi|868566092|ref|NC_017267.2|	seq_2
 3995466  3996094  |      629        1  |      629      629  |    99.36  | gi|868566092|ref|NC_017267.2|	seq_55
 4189285  4190427  |     1143        1  |     1143     1143  |    99.65  | gi|868566092|ref|NC_017267.2|	seq_54
 4269203  4270813  |     5847     4239  |     1611     1609  |    98.01  | gi|868566092|ref|NC_017267.2|	seq_126
 4515876  4517347  |     1472        1  |     1472     1472  |    98.71  | gi|868566092|ref|NC_017267.2|	seq_25
 4516051  4516679  |      629        1  |      629      629  |    99.52  | gi|868566092|ref|NC_017267.2|	seq_55