Mercurial > repos > devteam > bam_to_sam

comparison bam_to_sam.xml @ 2:c09a20532957 draft

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author devteam
date Thu, 05 Mar 2015 21:22:11 -0500
parents 250151b4d934
children c1419fa820c6
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1:250151b4d934 2:c09a20532957
54 54
55 This tool uses the SAMTools_ toolkit to produce a SAM file from a BAM file. 55 This tool uses the SAMTools_ toolkit to produce a SAM file from a BAM file.
56 56
57 .. _SAMTools: http://samtools.sourceforge.net/samtools.shtml 57 .. _SAMTools: http://samtools.sourceforge.net/samtools.shtml
58 58
59 ------
60
61 **Citation**
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63 For the underlying tool, please cite `Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R; 1000 Genome Project Data Processing Subgroup. The Sequence Alignment/Map format and SAMtools. Bioinformatics. 2009 Aug 15;25(16):2078-9. <http://www.ncbi.nlm.nih.gov/pubmed/19505943>`_
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65 </help> 59 </help>
60 <citations>
61 <citation type="doi">10.1093/bioinformatics/btp352</citation>
62 </citations>
66 </tool> 63 </tool>