Mercurial > repos > devteam > bamtools_split

changeset 4:0a7b0989fa09 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/bamtools/bamtools_split commit 1cacd14cfb2429fefa91fdd05c82d2e36d23283a"
author iuc
date Sat, 27 Nov 2021 10:04:19 +0000
parents 9676127a1ed2
children 96c9315b0e29
files bamtools_split.xml macros.xml
diffstat 2 files changed, 8 insertions(+), 7 deletions(-) [+]
line wrap: on
line diff
--- a/bamtools_split.xml	Wed Dec 04 07:47:03 2019 -0500
+++ b/bamtools_split.xml	Sat Nov 27 10:04:19 2021 +0000
@@ -1,8 +1,9 @@
-<tool id="bamtools_split" name="Split" version="2.4.0">
+<tool id="bamtools_split" name="Split" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
     <description>BAM datasets on variety of attributes</description>
-    <requirements>
-        <requirement type="package" version="2.4.0">bamtools</requirement>
-    </requirements>
+    <macros>
+          <import>macros.xml</import>
+    </macros>
+    <expand macro="requirements"/>
     <command>
         <![CDATA[
             echo "BAM" > $report &&
@@ -59,7 +60,6 @@
         <test>
             <param name="input_bams" ftype="bam" value="bamtools-input2.bam"/>
             <param name="analysis_type_selector" value="-reference"/>
-            <param name="output_type" value="dataset_collection"/>
             <output name="report">
                 <assert_contents>
                     <has_line line="BAM" />
--- a/macros.xml	Wed Dec 04 07:47:03 2019 -0500
+++ b/macros.xml	Sat Nov 27 10:04:19 2021 +0000
@@ -1,9 +1,10 @@
 <?xml version="1.0"?>
 <macros>
-    <token name="@VERSION@">2.4.0</token>
+    <token name="@TOOL_VERSION@">2.5.1</token>
+    <token name="@VERSION_SUFFIX@">0</token>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="@VERSION@">bamtools</requirement>
+            <requirement type="package" version="@TOOL_VERSION@">bamtools</requirement>
             <requirement type="package" version="1.4.1">samtools</requirement>
         </requirements>
     </xml>