Mercurial > repos > devteam > bowtie2

diff bowtie2_wrapper.xml @ 23:17062a0decb7 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bowtie2 commit d611e968158b012c10d3f8b661af1f07313f06d7
author iuc
date Wed, 06 Jun 2018 17:23:32 -0400
parents c3dd1aeb7d07
children 017aba02828d
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--- a/bowtie2_wrapper.xml	Thu Apr 12 17:42:40 2018 -0400
+++ b/bowtie2_wrapper.xml	Wed Jun 06 17:23:32 2018 -0400
@@ -557,6 +557,7 @@
                         </action>
                     </when>
                 </conditional>
+                <expand macro="dbKeyActions" />
             </actions>
         </data>
         <data format="fastqsanger" name="output_aligned_reads_l" label="${tool.name} on ${on_string}: aligned reads (L)" >
@@ -579,6 +580,7 @@
                         </action>
                     </when>
                 </conditional>
+                <expand macro="dbKeyActions" />
             </actions>
         </data>
         <data format="fastqsanger" name="output_aligned_reads_r" label="${tool.name} on ${on_string}: aligned reads (R)">
@@ -596,6 +598,7 @@
                         </action>
                     </when>
                 </conditional>
+                <expand macro="dbKeyActions" />
             </actions>
         </data>
         <data format="fastqsanger" name="output_unaligned_reads_r" label="${tool.name} on ${on_string}: unaligned reads (R)">
@@ -613,6 +616,7 @@
                         </action>
                     </when>
                 </conditional>
+                <expand macro="dbKeyActions" />
             </actions>
         </data>
         <data format="bam" name="output" label="${tool.name} on ${on_string}: aligned reads (BAM)">
@@ -636,6 +640,7 @@
                 </action>
               </when>
             </conditional>
+            <expand macro="dbKeyActions" />
           </actions>
         </data>
         <data format="sam" name="output_sam" label="${tool.name} on ${on_string}: aligned reads (SAM)">
@@ -656,10 +661,14 @@
                 </action>
               </when>
             </conditional>
+            <expand macro="dbKeyActions" />
           </actions>
         </data>
         <data format="txt" name="mapping_stats" label="${tool.name} on ${on_string}: mapping stats">
           <filter>save_mapping_stats is True</filter>
+          <actions>
+            <expand macro="dbKeyActions" />
+          </actions>
         </data>
     </outputs>
     <tests>