annotate test-data/bwa_wrapper_in3.fastqsanger @ 3:b4427dbb6ced draft default tip

Convert tool to use $GALAXY_SLOTS if available.
author Nate Coraor <nate@bx.psu.edu>
date Thu, 16 Jan 2014 13:11:51 -0500
parents ffa8aaa14f7c
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
1 @seq1/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
2 ACGCTCCTTTAAAATATC
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
3 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
4 IIIII$%*$G$A31I&&B
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
5 @seq2/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
6 CAGCTCGAGAAGCTCTTA
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
7 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
8 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
9 @seq3/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
10 CTACTGACCGCTCTCGTG
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
11 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
12 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
13 @seq4/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
14 TAGGTGGTCAACCATTTT
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
15 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
16 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
17 @seq5/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
18 TTTCTATGTGGCTTAATA
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
19 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
20 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
21 @seq6/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
22 GTAGGTGGTCAACAATTT
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
23 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
24 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
25 @seq7/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
26 TTTAATTGCAGGGGCTTC
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
27 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
28 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
29 @seq8/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
30 ATGCGCTCTATTCTCTGG
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
31 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
32 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
33 @seq9/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
34 TTCTGTTGGTGCTGATAT
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
35 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
36 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
37 @seq10/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
38 AGGGCGTTGAGTTCGATA
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
39 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
40 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
41 @seq11/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
42 ATCCCCAATGCTTGGCTT
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
43 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
44 IIIII$%*$G$A31I&&B
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
45 @seq12/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
46 GGATTGGCGTTTCCAACC
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
47 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
48 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
49 @seq13/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
50 CCCCAATCCTTGCCTTCC
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
51 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
52 IIIAAIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
53 @seq14/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
54 TGATATTTTGACTTTGAG
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
55 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
56 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
57 @seq15/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
58 TTACGAAACGCGACGCCG
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
59 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
60 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
61 @seq16/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
62 TTATTTTTCTCCAGCCAC
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
63 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
64 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
65 @seq17/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
66 AAACAATACTTTAGGCAT
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
67 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
68 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
69 @seq18/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
70 CCGTTCCATAAGCAGATG
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
71 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
72 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
73 @seq19/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
74 GAGCGTCCTGGTGCTGAT
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
75 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
76 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
77 @seq20/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
78 ACTCCGGTTATCGCTGGC
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
79 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
80 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
81 @seq21/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
82 TAAGCATTTGGTTCAGGG
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
83 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
84 IIIII$%*$G$A31I&&B
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
85 @seq22/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
86 GTTACGACGCGACGCCGT
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
87 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
88 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
89 @seq23/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
90 TTTAATAACCCTATAGAC
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
91 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
92 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
93 @seq24/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
94 CTTGGCTTCCCTAAGCAG
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
95 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
96 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
97 @seq25/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
98 CGTGCTCGTTGCTGCGTT
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
99 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
100 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
101 @seq26/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
102 AAGGATGTTTTCCGTTCT
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
103 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
104 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
105 @seq27/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
106 TGTTTGGTGCTGATATTG
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
107 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
108 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
109 @seq28/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
110 TCCAGCCACTAAAGTGAG
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
111 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
112 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
113 @seq29/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
114 GATAATGATTGGGGTATC
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
115 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
116 IIIIIIIIIIIIIIIIII
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
117 @seq30/2
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
118 ACCATAAGCAGATGGATA
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
119 +
ffa8aaa14f7c Uploaded initial tarball.
devteam
parents:
diff changeset
120 IIIIIIIIIIIIIIIIII